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  • 1
    Comet MS/MS search engine

    Comet MS/MS search engine

    Comet open source tandem mass spectrometry (MS/MS) search engine.

    September 2021: the code repository has migrate to https://github.com/UWPR/Comet Comet is an open source tandem mass spectrometry (MS/MS) sequence database search engine. It identifies peptides by searching MS/MS spectra against sequences present in protein sequence databases. Comet currently exists as a simple Windows or Linux command line binary that only does MS/MS database search.
    Downloads: 3 This Week
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  • 2

    PZEM PC interface (web app)

    Peacefair PZEM PC application (web app)

    You can check this app online here: https://koshka.ddns.net/pzemweb/v1.1/ (You will need Chrome browser or similar ) A web-app (web-interface) for Peacefair PZEM energy monitors. It is loaded from https web server but works completely on a local machine with local devices and local database. It uses Web Serial API to connect to PZEM devices and IndexedDB to store data.
    Downloads: 3 This Week
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  • 3
    Morpho
    R-package to perform analysis of landmark based geometric morphometrics. Installation instructions: https://github.com/zarquon42b/Morpho/blob/master/README.md
    Downloads: 1 This Week
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  • 4
    TheoDORE

    TheoDORE

    Theoretical Density, Orbital Relaxation and Exciton analysis

    ...TheoDORE is interfaced to a number of quantum chemical programs (Q-Chem, Columbus, Turbomole, ...) and can be used for a wide range of excited state methods (MR-CI, ADC, CC, TDDFT). It is written in a modular fashion to allow for an easy extension of these capabilities. Code development moved to github: https://github.com/felixplasser/theodore-qc
    Downloads: 1 This Week
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    Tranalyzer

    Tranalyzer

    Tranalyzer flow generator packet analyzer moved to: tranalyzer.com

    ...Flow based and packet based content inspection and extraction, better reporting, geo and organisation labeling, forensics support and encapsulation support such as ethip, teredo, anything in anything, SCTP, etc are new features of the 0.8.14. Checkout the tutorials: https://www.tranalyzer.com/tutorials
    Downloads: 0 This Week
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  • 6
    Qgama

    Qgama

    Adjustment of local surveying networks, binary builds for Windows

    The archive has been moved to https://ftp.gnu.org/gnu/gama/windows/ GNU Gama is a project dedicated to adjustment of geodetic networks. It is intended for use with traditional geodetic surveying which are still used and needed in special measurements (e.g., underground or high precision engineering measurements) . Qgama is a Qt based user interface for GNU Gama adjustment of geodetic networks in which XML input is complemented with a database.
    Downloads: 1 This Week
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  • 7
    Fusion Detection Pipeline

    Fusion Detection Pipeline

    Fusion gene detection pipeline bundled into a Singularity container.

    ...Identified fusion genes are reported with evidence levels based on our filtering. This pipeline has been developed and optimized in a study of 806 AML patient samples (https://doi.org/10.3324/haematol.2021.278436).
    Downloads: 0 This Week
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  • 8
    XRD CUBIC

    XRD CUBIC

    Simulate crystal cell length (a), Miller indices {h, k, l}, d-spacing

    ...Designed by: Dr. M Kanagasabapathy, Asst. Professor, Department of Chemistry Rajus’ College, Madurai Kamaraj University, Rajapalayam, (TN) INDIA 626117 Home Page: https://www.enote.page/2021/12/XRD-Cubic.html
    Downloads: 2 This Week
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  • 9
    Triangolo

    Triangolo

    Liothyronine dosage calculator

    Calculator software helping to determine L-T4 and L-T3 substitution dosage according to the algorithms provided by the European Thyroid Association (ETA).
    Downloads: 0 This Week
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  • 10
    VANESA
    This project moved to GitHub in 2021 and is available at: https://cbrinkrolf.github.io/VANESA/ This tool is a platform-independent software to create individual pathways and to examine biological networks of distributed, heterogeneous data sources, e.g. KEGG, BRENDA. VANESA also offers Petri net modeling of extended hybrid Petri nets which can be also simulated using the OpenModelica framework.
    Downloads: 0 This Week
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  • 11
    ...Ab Initio protein structure prediction methods generate numerous structural candidates, which are referred to as decoys. Calibur is an efficient tool for finding the decoy with the most number of neighbors within a threshold distance. If you prefer to use GitHub, go to https://github.com/kalngyk/calibur
    Downloads: 0 This Week
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  • 12
    QBlade

    QBlade

    Wind Turbine Rotor Design and Simulation

    QBlade 2.0 released!!!! QBlade 2.0 released!!!! QBlade 2.0 released!!!! This project page is discontinued, you find our new webpage at: https://qblade.org/ This project page wont be updated in the future, however, everything in the "Files" section and the Forum Content will remain avaliable to everyone...
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    Downloads: 47 This Week
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  • 13
    GroIMP

    GroIMP

    Growth-grammar related Interactive Modelling Platform

    Important: Groimp migrates to Gitlab. You can find the latest code at "https://gitlab.com/grogra/groimp/". The version on Sourceforge will not be updated anymore. The modelling platform GroIMP is designed as an integrated platform which incorporates modelling, visualisation and interaction. It exhibits several features which makes itself suitable for the field of biological or ALife modelling: The “modelling backbone” consists in the language XL.
    Downloads: 2 This Week
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  • 14

    QModMaster

    Modbus TCP,RTU Master Software.

    ...QModMaster also includes a bus monitor for examining all traffic on the bus. QModMaster is based on libmodbus <http://www.libmodbus.org/> for modbus communication and on QsLog <https://bitbucket.org/codeimproved/qslog> for logging. Supports both Windows and Linux. For Windows a pre-compiled binary is availiable. It does not require instalation, just unzip and run. You can download the latest stable version from here <https://sourceforge.net/projects/qmodmaster/files/qModMaster-Win32-exe-0.5.2-3.zip/download>. ...
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    Downloads: 2,225 This Week
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  • 15
    Tcl/Tk support for the EPICS control system along with EPICS aware megawidgets. Note that as of September 27, 2023, development and new releases of this project will occur on github. See: https://github.com/FRIBDAQ/EpicsTcl
    Downloads: 0 This Week
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  • 16

    Aseryla2

    Aseryla2 code repositories

    This project describes a model of how the semantic human memory represents the information relevant to the objects of the world in text format. It provides a system and a GUI application capable of extracting and managing concepts and relations from English texts. https://aseryla2.sourceforge.io/
    Downloads: 0 This Week
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  • 17
    myNetPCB

    myNetPCB

    Community driven PCB Layout and Schematic capture software

    PCB Layout and Schematic capture tool for Win/Linux/Mac. Source code at https://github.com/sergei-iliev/myNetPCB
    Downloads: 4 This Week
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  • 18

    AhoTTS - TTS for Basque and Spanish

    Text-to-Speech for Basque and Spanish

    ...It includes linguistic processing and built voices for the languages aforementioned. Its acoustic engine is based on hts_engine and it uses a high quality vocoder called AhoCoder. Developed by Aholab Signal Processing Laboratory: https://aholab.ehu.es/aholab/ http://aholab.ehu.es/ahocoder/
    Downloads: 0 This Week
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  • 19

    PCRaster

    PCRaster environmental modeling software

    Note: Active projects have been copied to Github: https://github.com/pcraster News, project information, documentation and more are available at http://www.pcraster.eu PCRaster is a collection of tools and software libraries tailored to the construction of spatio-temporal environmental models. Application domains are amongst others hydrology (rainfall-runoff, global water balance, groundwater (with Modflow)), ecology, or land use change.
    Downloads: 3 This Week
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  • 20
    nutshell

    nutshell

    A GUI for the freeware Geographical Information System PCRaster

    ...It uses the conda installation of PCRaster and can also use GDAL. Mapedit has been completely renewed. The GIT repository is available linked to PCRaster and available here: https://sourceforge.net/projects/pcraster/ Mapedit code : https://github.com/vjetten/MapEdit NutShell code: https://github.com/vjetten/NutShell The code is currently compiled for windows systems but is tested under ubuntu.
    Downloads: 0 This Week
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  • 21
    Splicing Prediction Pipeline

    Splicing Prediction Pipeline

    Splicing Prediction Pipeline or SPiP

    SPiP is a tool to predict the splice alteration of variant by integrate several prediction tool in a global pipeline. You can also download SPiP in zip format: https://sourceforge.net/projects/splicing-prediction-pipeline/files/SPiP_alone_v2_1.zip For Linux (GitHub): https://github.com/LBGC-CFB/SPiP If you have questions, please contact me to: r.leman@baclesse.unicancer.fr or raphael.leman@orange.fr v2.1 corrected (07/2021) : correction of score calculation v2.1 (06/2021): Most strigent on "Alter by complex event" v2.0 (04/2021): New SPiP with random forest modelization old change detailled in https://sourceforge.net/projects/splicing-prediction-pipeline/files/changeLogBeforev2.0.txt
    Downloads: 12 This Week
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  • 22

    VOX-FE

    Voxel-based Finite Element Analysis for Biomechanical Applications

    VOX-FE is voxel-based FE software, developed jointly between the University of Hull's Medical & Biological Engineering Research Group and Edinburgh Parallel Computing Centre, with a sophisticated graphical user interface that allows the complex loading regimes that are inevitably present in biomechanical analyses to be readily applied to the model geometry, and the resultant 3D stress and strain patterns to be visualized easily. In addition to the introduction above, several example videos are available on YouTube: https://www.youtube.com/watch?v=fjtjrM1Z1JQ https://www.youtube.com/watch?v=WVp1u1jlD3g https://www.youtube.com/watch?v=nT4xWlcm7aQ We also recorded a webinar with ARCHER, presenting VOX-FE 2.0: https://www.youtube.com/watch?v=q7GD7Nv5LYs
    Downloads: 2 This Week
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  • 23

    protoFrameworkSamples

    Samples for the protoFramework project

    Samples for the protoFramework project. See https://sourceforge.net/projects/protoframework/ for the master project. This is a Dassault Aviation project
    Downloads: 0 This Week
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  • 24
    NOTE: Moved to https://github.com/vapier/pcalc Pcalc is a command line calculator handling HEX DEC OCT BIN. It can process a script, save variables to file, full math parser, parentheses, exponential, sin/cos, sqrt, date, inch/mm celsius/f, compound expressions ...
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    Downloads: 8 This Week
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  • 25
    A Windows C# computer program was written that tested the first 1 trillion numbers for the Collatz Conjecture. See the Wiki page for a description of the math conjecture. https://en.wikipedia.org/wiki/Collatz_conjecture The program tests a number of ways for researching various patterns. A white paper is included that describes various results of the research. Also included are a number of data files of results of the program.
    Downloads: 0 This Week
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