Search Results for "python 3"
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Showing 22 open source projects for "python 3"
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PyAMS
PyAMS (Python for Analog and Mixed Signals) CAD approach
PyAMS (Python for Analog and Mixed Signals) is used to simplify modeling analog elements and simulate electronic circuit The objectives of PyAMS is: - Drawing circuit by schematic (CAD approach); - Simulating the circuit; - Creating new symbols for models; - Creating new models of electrical elements by using Python language with pyams_lib; - Presenting simulation results in waveform or in probe; - PyAMS is developed with Python 3+, ElectronJS and NodeJs - Licensed under: PyAMS is free to use. ... -
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miRge3
Comprehensive analysis of small RNA sequencing data
An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output. miRge3.0 is developed in python v3.8 and is a recent update of our previous version miRge2.0. This build includes command line interface (CLI) and cross-platform Graphical User... -
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GeigerLog
Python program for Geiger counters and Environmental Sensors
GeigerLog is a combination of data logger, presenter, and analyzer, and is now released in version 2.1! Based on Python (Version 3), it runs on Linux, Windows, Macs, Raspberry Pi, and other. GeigerLog is WiFi-enabled for servers and clients; it can be monitored by SmartPhone. Initially developed for Geiger counters, it is now a more universal tool, which equally well handles data like temperature, air-pressure, humidity, CO2. Continues to support Geiger counters like GQ Electronic's GMC-300/500/600 , RadMon, RadPro, Gamma-Scout, audio-click and other low-cost Geiger counters, IoT devices, I2C based sensors, GQ EMF devices. ... -
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QUAST
Quality Assessment Tool for Genome Assemblies
QUAST performs fast and convenient quality evaluation and comparison of genome assemblies. It is maintained by the Gurevich lab at HIPS (https://helmholtz-hips.de/en/hmsb). For the most up-to-date description, please visit http://quast.sf.net. Below are just some highlights. QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). A... -
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Earth Enterprise
Google Earth Enterprise - Open Source
Earth Enterprise is the open source version of Google Earth Enterprise (GEE), a powerful geospatial application suite that enables organizations to build and host custom 3D globes and 2D maps using their own imagery and data. Unlike Google Maps or Google Earth, Earth Enterprise does not include Google’s proprietary imagery but instead provides the tools needed to manage and visualize private geospatial datasets. The system is composed of three main components: Fusion, which processes and... -
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bioweb
polyglot language framework to analyze genetic data
polyglot framework using Python/C++/JavaScript to fast develop applications to analyze biological sequences -
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Tux Math Scrabble
12÷16×3=9÷4
Latest version 0.9.1 runs on Python3. Date: June 15, 2023 Online/touch-screen version: https://www.asymptopia.com/tuxmathscrabble Encourages kids to construct compound equations and consider multiple abstract possibilities. -
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GCB_package
Stand-alone version of the Genome Complexity Browser
This application allows observing genome rearrangements in prokaryotic genomes. It provides rearrangements frequencies profiles and genomes graph representation. -
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dadosSemiotica
Collecter and manager of semiotica annalisis data
This program is a web application to collect and organize data of text analysis. It works with sets of texts and the analysis are done on portions of the length of a sentence. One of the preprocessing modules is based on CoGroo (A LibreOffice & OpenOffice.org Portuguese Grammar Checker). -
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Open Automation
Building automation (like KNX or OpenHAB) software (like CometVisu).
This project aims to provide software usefull in automation tasks like building automation. Different backends are supported like KNX or OpenHAB. Note: The project has moved to GitHub. Please consult: https://github.com/CometVisu/CometVisu - for the CometVisu https://github.com/OpenAutomationProject - for the different OpenAutomation subprojects -
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YoMo
You Only Meter Once - The open hardware smart metering system
Researches have shown that immediate feedback can increase energy saving dramatically. YoMo aims to empower people using low-cost open hardware smart meters in their household. The metering system consists of a coordination unit, a raspberry pi, and several smart meters, arduino boards equipped with communication shields and our self-designed yomo metering shield. The smart meters are attached to household devices and monitor their energy consumption. The gathered data is timestamped and... -
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PhyloTrack
PhyloTrack, D3.js and JBrowse for phylogeny and positioning of samples
PhyloTrack is a JavaScript--based software tool that integrates the D3.js library for data visualization with the JBrowse tool for genome browser representation. It requires a phylogenetic tree of the common Newick data format as input, as well as three meta data files for samples, clade-defining nodes and clade color definitions - all in tab delimited format. Functionality within PhyloTrack shows the informative markers at each node in the phylogenetic tree, therefore highlighting... -
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openSEQ
NGS compute distro proloaded with pipeline analysis software
...Software included (location - name): path - biobambam path - bwa path - bowtie2 path - bowtie path - cufflinks path - bcftools path - tophat path - scalpel path - samtools path - sra-toolkit path - bamtools path - delly path - delly-parallel path - picard-tools path - fastahack path - twoBitToFa ~/prog/java/ - mutect ~/prog/python/ - platypus ~/prog/java/ - gatk -
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pyMantis is a data-management system for (systems) biology build on the web2py framework. It features: tree based file explorer, relational db table wizzard with automated creation of user interfaces, internal and external access management, wiki, ..
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minder
Monitoring your infrastructure for free.
This software presents a flexible and configurable proposal for monitoring and management of real and virtual HPC infrastructures, compatible with paradigm of cloud computing. We help you to answer: 1) What is the performance of my resources? 2) What equipment and resources do we have already? 3) What do we need to upgrade or repair? 4) What can we consolidate to reduce complexity or reduce energy use? 5) What resources would be better reused somewhere else? Status: PreAlpha, so... -
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Automata is a Tool to simultaneously control several Instruments for Test and Measurement. Automata allows Hardware designers to develop and execute various testcases. Automata support instruments that are connected to a LAN. the GUI is a web browser
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This project aims to provide an open source fleet management system with special focus on modularity and integration.
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Goldify is a set of tools that allow automated addition of links into electronic documents. Its main purpose is to allow such addition of links into documents that wish to link to the IUPAC GoldBook (http://goldbook.iupac.org).
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JLink lets users author flow charts based on ISO 5807 and IBM standards. Developers can use JLink to add flowcharts to applications, serve a flow chart over the web in PDF or PNG, or dynamically create a flowchart with Javascript, Python or Ruby scripts
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A dialect of XUL implementing most of Mozilla XUL's Fourth Draft. XML User Interface Language (XUL) is a method for easily creating GUI applications. Lux XUL supports Python scripting via Jython 2.1.
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Green Cloud Online portal
Green cloud: A versatile sensor based precision agriculture system, in
In Green Cloud here is a central global server which does the work of global database management along with providing complex analysis services for the users (farmers, scientists) through the client machines and the public access web portal. The existing agricultural databases throughout the world can also be used for inference purposes and their data may also be updated by our server. The meteorological servers can be accessed for climate data.This server-client architecture mandatory in...
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