Search Results for "perl" - Page 2
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Showing 47 open source projects for "perl"
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Dasty is a web client for visualizing protein sequence feature information using DAS, the Distributed Annotation System.
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This project aims the requirement of managed informations / documents in the treatment of patients, i.e. integrated care. The underlaying data model implements standards of electronic health recording, the project is based on a SQL db and Java EE framework. This is currently a student driven project for educational purposes.
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A bioinformatics tool to identify and remove rRNA sequences from metagenomic and metatranscriptomic datasets. The rRNA-like sequences are classified by domain, subunit. and bacterial phyla. Coverage plots for the top hits are provided as well.
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The Generic Genetic Studies Database (GGSD) is a web-based, relational database driven data management software package for the management of large scale genetic studies.
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GPL-licensed Electronic Medical Record and Practice Management system for medical providers that runs in any web browser in multiple languages. It provides an XML-RPC backend and multiple import and export formats, as well as reporting and other features
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ASSD is a simple biological sample database focused on the storage of proteomics data. It tracks every processing step incl. results throughout a sample's lifetime. Next to proteomics data it can also store other results like FACS or Western Blots.
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A database of linguistic annotation of medical text (from MEDLINE), including corpora used with ABGene, BioCreative I and II, and the MedPost training corpus.
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Cscape is an application for visualizing and navigating through data from a Reverse Phase Protein Microarray (RPMA). Cscape uses the Google Maps API to map the RPMA data on top of an image of a cancer cell and its associated pathways.
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BioPerl implemented in JavaScript. The library aims to promote and aid the development of bioinformatics applications in JavaScript much the same way as BioPerl helps bioinformatics development in Perl.
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A repository linking to eight Bioinformatics Resource Centers (BRCs) sponsored by the NIAID. The BRCs are providing web-based resources to scientific community conducting basic and applied research on organisms considered potential agents of bioterrorism
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BioNotate is an open-source web-based tool for the collaborative and distributed annotation of biomedical text with entities and facts of interest.
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The system is designed for the automated analysis of high throughput sequencing data. At present Aped is focused on the analysis of data derived from Sanger and 454 sequencing. Additional functionality exists for SAGE and taxonomic profiling.
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SIRS stands for "Smart Indicators for Reflection Support". SIRS is a framework for developing Indicators on top of sensor networks in web-based and ambient environments for data aggregation, information visualization and context adapation.
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epiPATH is a platform to store and analyze evolutionary, population and epidemiological data from infectious diseases. It is designed to aid users in daily work with data generated in sequencing projects as well as clinical and epidemiological data.
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EuCAP is a web based tool and pipeline to that facilitates the submission of functional and structural community annotation to a genome annotation project.
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A DHTML interface to the MapServer GIS engine. (Get MapServer at http://mapserver.gis.umn.edu). MapSurfer allows interactive display, panning, and zooming of geographic data along with feature querying. See http://www.scign.org/mapsurfer/mapsurfer/
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The Internet Censor is a multi-platform, Internet clustering program, for which the resulting data will be used in the creation of a non-profit content-filtering Internet Search Engine for children.
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OpenNetTerminologyManager aims at developing a freely available concept based terminology management system which is fully web based. Target audience: everybody who deals with translation and localisation.
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The Cybertory™ Virtual Molecular Biology Laboratory is an on-line virtual environment for conducting simulated experiments in molecular genetics.
