Open Source JavaScript Scientific/Engineering Software - Page 12

Biological General Repository for Interaction Datasets (BioGRID) is a curated biological database of protein-protein interactions. It strives to provide a comprehensive resource of Protein-Protein interactions for all major species.

Bioinformatics as an emerging research area spreads out many challenges to both the Bioinformaticists and the Bioinformaticians. BioGenie is presented as a complete package for tackling these challenges. Accommodating all three platforms, that is, a desktop application, a web application and a mobile (android-based) application, BioGenie outperforms all existing softwares engineered to assist heavy and complex computations. The GUI is very well-designed guiding the user technically with ease.

BioNotate is an open-source web-based tool for the collaborative and distributed annotation of biomedical text with entities and facts of interest.

This project helps to digitize field data for a certain Bird Census method. Namely, bird census based on personal inspection or small (~10 km^2) regions with recording birds' position and behaviour on paper. This project makes it easy to annotate such field data and to make this data available for statistical analysis.

Biomedical Information Management System (BIMS) is a modular multilayer object - oriented software architecture, which provides a flexible computational solution to capture and manage a heterogeneous biomedical data: textual and visual information.

BizGEO is an open source platform developed to provide a simple interface for geographical data collection and data storage. BizGEO is integrated with a standard open source map server (GeoServer) to form an integrated GIS data collection suite. BizGEO is made up of three main components; BizGEOServer which is a facility for managing data by organising them in projects; BizGEOApp, a mobile app which is being used by the field users to collect data through set of defined forms, and GeoServer which manages and publishes the data using open standards.

Book-A-Lyze is an open source web application for analysis and visualization of social structures at Facebook. The project is part of the study course “Media Management and Production” at the University of Applied Sciences, Kaiserslautern.

BoulderALE is an RNA alignment editor, which allows for the annotation of basepairs, annotation and collapsing of features (horizontal) and sequences (vertical), along with 2D display of sequences and base composition given a secondary structure.

BrainBox is a simulation toolbox, similar to MatLab, that simulates physical and mathematical models remotely via WebServices. BrainBox provides a user interface to help create the diagrams and interact with the simulation results with a built-in languag

This project is UI to guide the user through the steps of home brewing. Each beer has a recipe of ingredients, but it also has a “recipe” for the process to make the beer. This app allows you to load a recipe (BeerXML), guide you through the brewing steps and record any details so that you can improve next time. By default, this app relies on user inputs and feedback from the real-world. There are easy hooks to a link up a real system, so that if you wanted to automate some of the input and feedback it could be possible (ex. read temperature from sensor. Turn heat source on/off). This project uses the free Maker Edition of the Ignition platform. https://inductiveautomation.com/ignition/maker-edition Sierra Nevada and Stone Brewery use the (paid) Ignition platform. https://inductiveautomation.com/resources/casestudy/ignition-system-meets-all-user-requests https://inductiveautomation.com/resources/casestudy/brewery-improves-efficiency-in-multiple-areas-with-ignition

CAMERA is a research environment and repository for metagenomic data

A CFML to JSP translator

This program uses a combination of HTML5 and javascript to interactively draw and edit 3-dimensional structures of small molecules. While several useful web pages are included that require no modification, library calls are documented and examples provided to show how more advanced web pages can be created. A paper describing this program is available at the Journal of Cheminformatics (http://www.jcheminf.com/content/5/1/46).

Connecting Historical Authorities with Links, Contexts and Entities. CHALICE is a historic placename gazetteer for the UK, published as Linked Data and linked to other widely-used sources of placename reference information on the semantic web.

The CYSU CYBR-SUITE is a remote Scrum solution with advanced, unique communication capabilities - the CFLX. 1. Sprint Vision Boards → clear OKRs 2. User-Story-Templates 3. Requirement-Templates, 4. Product-Backlog-Item's & Task's assessments, 5. Personality assessments, ...these mandatory ways to add more context & breaking-down complexity enable a better overview and a better understanding - for man and machine... ...based on the standardized structure of the DATA WE ARE NOW CREATING AND STORING, these values can now be used directly for the inputs and targets of our artificial neuronal networks and generate our competitive advantage based on SUPERIOR MACHINE LEARNING capabilities. The CYSU is a docker-compose solution: 1. prepare your Linux system with docker & docker-compose, modify the init-script & set YOUR SSL-values, chmod +x 2. docker-compose up --build Follow the detailed step-by-step documentation. >>> PS: YOU NEED A LINUX SERVER FOR INSTALL IT ! <<<

This SourceForge.net project serves as repository and distribution point for Carbon Five Open Source software and documentation.

Care4G is a web-based software, as forking of the most famous care2x, it will be a complete HIS for the II Millennium...

It is a Client Application developed in Java that sends simultaneous OGC CSW requests to several metadata catalogues (ebRim or ISO 19115/19119 profile), processes the responses and shows them in a single web page.

Help us to improve Cell Culture. We want to hear your feedback! Request new Cell Culture feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/fw Cell Culture is a highly specialized protocol-driven system designed to support development of the cell lines. Cell Culture manages activities related to the growth and maintenance of cell lines, provides stable cell lines development and incorporates laboratory methods facilitating faster and more accurate inventory lifecycle management: from the procurement of cell lines and request processing to tracking of tubes and other items in the laboratories. Cell Culture provides easy to follow, step-by-step protocols, with tips and notes and is of interest to researchers, technicians and process engineers using cell culture within the biotechnology, biomedicine and pharmaceutical industries.

CellPublisher is a free, open source program to improve the navigation of biological pathways. It converts CellDesigner diagrams into fully-featured maps that live inside a browser. The navigation is based on the Google maps API.

ChemLearing is a lightweight, easy to use e-learning platform - for both the student as well as the teacher.

Userscripts for chemical RDFa semantics using the Operator (>0.8) add-on for Firefox/

The Chemical Manager application can be of great help to Organic Chemistry Departments. University research groups will benefit from using this application, since it was optimized for their needs. Currently, Technion Chemistry department is benefiting from it.

Ciclope Planetarium is a web-based planetarium that provides a simulation of the sky from any location at any time and date. Developed using Google Maps API & AJAX. Available in PHP & J2EE. Integrated in the Ciclope Stars project (www.ciclope.info/stars)

CircularLogo is a light-weighted, easy to use web application that visualizes the intra-motif dependencies of a DNA or RNA motif.