Search Results for "regular expressions"
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Showing 8 open source projects for "regular expressions"
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JSiteDescriptor
Binding site descriptor generation for SVM based classification.
A set of java programs that extract coordinate and chemical information from PDB files. The binding site regions are extracted using grid based scheme. For binding site, spatio-chemical descriptor is generated based on PocketMatch algorithm of Dr. Kalidas (author of this project too). -
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FREJ stands for "Fuzzy Regular Expressions for Java" - it is a command-line tool and library which allow you easily compare strings with patterns disregarding nasty typos and considering several variants (like "Barack Obama", "B.H.Obama" etc.) Project sources are moved to github: https://github.com/RodionGork/FREJ
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FullFiller
Data Base Benchmarking tool
A very simple tool to automate benchmarking tests on MySQL DBs. It fills MySQL tables columns; perform customized tests; and outputs the results on CSV format. It uses Xeger, a java package for generating random text from regular expressions (http://code.google.com/p/xeger/). Xeger uses dk.brics.automaton java package developed by Anders Møller (http://cs.au.dk/~amoeller/automaton/index.html). -
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Ontea - Pattern based Semantic Annotation Platform. Ontea search or create semantic meta data from text or documents using pattern based approaches. Implementation currently includes regular expressions (regex) patterns
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Informarion extraction model for Java, supporting macros and named backreferences in regular expressions.
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Sequence studio main package provides classes and interfaces for various kinds of sequence alignment. Differently from regular expressions it computes similarity with two initially unknown strings. Project page provides code generating applet.
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JREC is a framework for building finite state automatons from regular expressions based on a general grammar.
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AMoRE is a collection of algorithms that deal with automata, monoids, regular expressions. Learn about the theory - this is not another regexp package.
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