Search Results for "ofn-layer-aligner"
Sort By:
Showing 61 open source projects for "ofn-layer-aligner"
View related business solutions-
Our Free Plans just got better! | Auth0You asked, we delivered! Auth0 is excited to expand our Free and Paid plans to include more options so you can focus on building, deploying, and scaling applications without having to worry about your security. Auth0 now, thank yourself later.
-
Cloud tools for web scraping and data extractionAutomate web data collection with cloud tools that handle anti-bot measures, browser rendering, and data transformation out of the box. Extract content from any website, push to vector databases for RAG workflows, or pipe directly into your apps via API. Schedule runs, set up webhooks, and connect to your existing stack. Free tier available, then scale as you need to.
-
1
BBMap
BBMap short read aligner, and other bioinformatic tools.
This package includes BBMap, a short read aligner, as well as various other bioinformatic tools. It is written in pure Java, can run on any platform, and has no dependencies other than Java being installed (compiled for Java 6 and higher). All tools are efficient and multithreaded. BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling arbitrarily large genomes with millions of scaffolds. -
2
Hibernate
An object relational-mapping (ORM) library for Java
The Hibernate projects offer a suite of powerful Java libraries to work with data. It is best known for Hibernate ORM, which provides relational persistence for Java models and is an implementation of the Jakarta Persistence specification. Hibernate projects do not consistently release binaries or documentation to SourceForge anymore. For up-to-date information, refer to the Hibernate website: * Hibernate ORM: https://hibernate.org/orm/ * Hibernate Validator:... -
3
GeoTools, the Java GIS toolkit
Toolkit for working with and mapping geospatial data
GeoTools is an open source (LGPL) Java code library which provides standards compliant methods for the manipulation of geospatial data. GeoTools is an Open Source Geospatial Foundation project. The GeoTools library data structures are based on Open Geospatial Consortium (OGC) specifications. -
4
miRDeep*
MiRDeep*
Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737. We will create index for you if you tell us your interested species (j.an@qut.edu.au). download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files" please find miRPlant in sourceforge for plant miRNA prediction. -
eProcurement SoftwareeBuyerAssist by Eyvo is a cloud-based procurement solution designed for businesses of all sizes and industries. Fully modular and scalable, it streamlines the entire procurement lifecycle—from requisition to fulfillment. The platform includes powerful tools for strategic sourcing, supplier management, warehouse operations, and contract oversight. Additional modules cover purchase orders, approval workflows, inventory and asset management, customer orders, budget control, cost accounting, invoice matching, vendor credit checks, and risk analysis. eBuyerAssist centralizes all procurement functions into a single, easy-to-use system—improving visibility, control, and efficiency across your organization. Whether you're aiming to reduce costs, enhance compliance, or align procurement with broader business goals, eBuyerAssist helps you get there faster, smarter, and with measurable results.
-
5
Image To Gerber Converter
Convert any image to gerber and drill files
...More info at: https://www.imagetopcb.com Demo video: https://youtu.be/HUvt0mOHv_M Forget about spending long hours etching and drilling at home, or learning to use complicated CAD software, schematics, layout design,… And more importantly, ImageToPCB is more than just a converter, it expands the potential of your design or image. It unlocks the possibility to easily make improvements and updating your design, as you will be able to make design modifications, add a silkscreen layer, resize drill diameters, create a soldermask layer to protect copper areas and to avoid accidental shorts, convert a single-side design into a double-side or multi-layer design,… all that just by editing your image with your preferred image editor. -
6
A Java-based listener and support classes to procure and decode RadNet messages from the network transport layer into their instrument-specific datasets to make those dataset members available to software as indexed name-value pairs.
-
7
Neuroph is lightweight Java Neural Network Framework which can be used to develop common neural network architectures. Small number of basic classes which correspond to basic NN concepts, and GUI editor makes it easy to learn and use.
-
8
JSDAI is a toolkit for STEP (ISO 10303), the STandard for the Exchange of Product Model data, that enables linking of CAD, CAM, PDM, PLM, CAx systems. JSDAI supports the development of Express data models (ISO 10303-11) and their implementation in Java.
-
9
HSRA
Hadoop spliced read aligner for RNA-seq data
...RNA-seq analyses typically begin by mapping reads to a reference genome in order to determine the location from which the reads were originated, which is a very time-consuming step. This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a distributed computing framework for scalable Big Data processing. HSRA currently supports single-end and paired-end read alignments from FASTQ/FASTA datasets. Moreover, our tool uses the Hadoop Sequence Parser (HSP) library (link above) to efficiently read the input datasets stored on the Hadoop Distributed File System (HDFS), being able to process datasets compressed with Gzip and BZip2 codecs. -
Dun and Bradstreet Connect simplifies the complex burden of data managementThe amount, speed, and types of data created in today’s world can be overwhelming. With D&B Connect, you can instantly benchmark, enrich, and monitor your data against the Dun & Bradstreet Data Cloud to help ensure your systems of record have trusted data to fuel growth.
-
10
Semantic Assistants
Natural Language Processing (NLP) for the Masses
Semantic Assistants support users in content retrieval, analysis, and development, by offering context-sensitive NLP services directly integrated in standard desktop clients, like a word processor, and web information systems, like a wiki. -
11
GeoWE
GeoData Web Editing [core SIG Web]
GeoWE is an open free GIS platform oriented to advanced geodata editing on The Web. The main aim of this initiative is to move the strenghts usually linked to desktop GIS to a web environment, by leveraging open source technologies. This is a free software project that is part of the open source GIS world, and it is developed in Java using the Google Web Toolkit framework. The geowe-core is being developed using the following technologies: - GWT (Google Web Toolkit) - JBoss... -
12
GeOxygene aims at providing an open framework which implements OGC/ISO specifications for the development and deployment of geographic (GIS) applications. It is a open source contribution of the COGIT lab. at the IGN (the French National Mapping Agency).
-
13
Universal Java Matrix Package
sparse and dense matrix, linear algebra, visualization, big data
The Universal Java Matrix Package (UJMP) is an open source Java library which provides sparse and dense matrix classes, as well as a large number of calculations for linear algebra such as matrix multiplication or matrix inverse. Operations such as mean, correlation, standard deviation, replacement of missing values or the calculation of mutual information are supported, too. The Universal Java Matrix Package provides various visualization methods, import and export filters for a large... -
14
ProC 3.0
smart Workflow Engine
ProC 3.0 is a scientific workflow engine to build, manage and execute workflows (pipelines) in heterogeneous environments, supporting GRID and other means of parallel processing. It includes a data management component (DMC) to transparently access databases for storage of results and automatically adds metadata to track the processing of data products, so that at every time a full processing history is available. The software was developed and used within the ESA Planck satellite mission. -
15
Immutable Sparse Wave Trees (WaveTree)
Realtime bigdata tool for bit strings up to 2^63 based on AVL forest
Realtime bigdata tool at the bit level based on immutable AVL forest which can be run in memory or, in future versions, as a merkle forest like a blockchain. Main object is a sparse bit string (Bits) that efficiently scales up to 2^63 bits normally compressed as forest has duplicated substrings. Bits objects support reading bit, byte, short, int, or long (Java primitives) at any bit index in 64 bit range. Example: instead of building a class to hold a header and then data, represent all of... -
16
SITools2 is a new CNES generic tool performed by a joint effort between CNES and scientific laboratories. The aim of SITools is to provide a self-manageable data access layer deployed on already existing scientific laboratory databases.
-
17
ojmapcoloring
Map Coloring Plugin for OpenJump
This is a map coloring plugin intended for OpenJump. It uses the Five Color Theorem to color an OpenJump layer with five colors such that no two adjacent features have the same color. -
18
Graph-RAT is a database abstraction layer designed to make it easy to use a large library of graph-analysis routines on a database as well as add new kinds of algorithms to data mining.
-
19
TreeBASE is a database and web front end that stores phylogenetic trees and the data matrices used to generate them. The current iteration comprises a complete rewrite of the schema and web layer, and will include a web services layer.
-
20
ldi
Lucene Oracle Integration using Data Cartridge API
Lucene Domain Index is full integration of Lucene project running inside the Oracle database using Oracle JVM. The integration provides a transparent detection of row data changes and an SQL layer for doing search. -
21
Semantic query optimization (SQO) is the process of finding equivalent rewritings of an input query given constraints that hold in a database instance. We present a Chase & Backchase (C&B) algorithm strategy that generalizes and improves on well-known methods in the field. The implementation of our approach, the pegasus system, outperforms existing C&B systems an average by two orders of magnitude. This gain in performance is due to a combination of novel methods that lower the complexity...
-
22
-
23
A java-based framework to determine file origins on a file system by accessing system and application logs and track the evidence trace through metadata.
-
24
Ferox
Ferox - Sequence Alignment with Fuzzy K-mers
Ferox is a DNA sequence alignment application that uses fuzzy k-mers to quickly and accurately align sets of sequence reads against a reference genome. Ferox can also be used to align whole genomes. The seeding mechanism used by Ferox is highly configurable, allowing custom fuzzy seeds to be created declaratively in an XML configuration file. -
25
The Prajna project is a collection of tools and utility classes combining visualization, geographic displays, data fusion, and semantic reasoning into a cohesive toolkit for enhancing information discovery and reasoning.
