Showing 1 open source project for "junctions"

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    PTESFinder

    Post-Transcriptional Exon Shuffling (PTES) Identification Pipeline

    ...Reads emanating from template-switching events are often characterised by large indels when aligned to the transcriptome. PTESFinder uses additional filters to exclude reads with ambiguous alignments around PTES exon-exon junctions, further increasing confidence in these supporting reads. PTESFinder identifies more PTES structures than other published methods whilst maintaining high specificity.
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