Showing 87 open source projects for "java expression evaluator"

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  • 1

    Math Expression Evaluator

    Evaluates simple mathematical expressions

    A simple Android app to evaluate mathematical expressions. It can handle variables. Somewhat more useful then a calculator but not sophisticated as mathcad or linux octave. Small app, does not take up much space. The following is an example of the type of input it takes: apple = 3, pear = 7 78 * (apple + pear) the output would be 780
    Downloads: 0 This Week
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  • 2
    JME (Java Math Expression)

    JME (Java Math Expression)

    Evaluador de expresiones matemáticas para Java en español

    Biblioteca para Java que implementa un potente evaluador matemático en español y un lenguaje estructurado de script, JMEScript, que hace uso de éste. Puede evaluar expresiones altamente complejas, que incluyen; * vectores * matrices * números complejos * números enteros y reales de precisión arbitraria, * expresiones booleanas * conjuntos * cadenas * diccionarios * grafos * correspondencias y relaciones finitas Permite especificar operaciones y funciones definidas por el...
    Downloads: 3 This Week
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  • 3
    Java multiprecision calculator

    Java multiprecision calculator

    Multiprecision calculator

    Multipresicion calculator, based on Bigdecimal Java class . It has a library (BigMath) that makes calculations with Bigdecimal. It has also an expression parser to parse the user input. It allows you to store user defined variables and functions . You can operate with them to be used for calculations or for creating new functions with composition. With the new version, you can also calculate the derivative of a function.
    Downloads: 1 This Week
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  • 4
    JQM Java Quine McCluskey

    JQM Java Quine McCluskey

    JQM - Java Quine McCluskey for minimization of Boolean functions.

    Java Quine McCluskey (JQM) implements the Quine-McCluskey algorithm with Petrick’s Method for minimizing Boolean functions. Designed for both education and industrial application, it handles up to 16 variables and functions. Uniquely, JQM bridges the gap between theory and practice: it visualizes the solution process with generated Karnaugh Maps for students, while supporting PLC engineers by exporting results to Structured Text (ST) and Ladder Diagram (LD). The software includes a GUI for...
    Downloads: 1 This Week
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  • 5

    xpressionparser

    parser of string expressions like sin(pi/4), functions x0+2*sin(pi*x)

    Expression parser of strings like sin(pi/4) is written in c++, javascript, java and php. It is also possible to create functions x0+2*sin(pi*x1) for further calculations.
    Downloads: 1 This Week
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  • 6
    LaBB-CAT

    LaBB-CAT

    A linguistic annotation store

    LABB-CAT is a browser-based linguistics research tool that stores recordings and regular-expression searchable text transcripts of interviews. The search results, entire transcripts, and media, can be viewed or exported in a variety of format
    Downloads: 12 This Week
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  • 7
    In addition to computing co-expression clusters, Maccu fishes potential co-expressed genes for a given bait set. All results can be further processed via graph-level operations so that we can compare graphs based on different reference data.
    Downloads: 0 This Week
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  • 8
    miRDeep*

    miRDeep*

    MiRDeep*

    Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737. We will create index for you if you tell us your interested species (j.an@qut.edu.au). download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files" please find miRPlant in sourceforge for plant miRNA prediction.
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    Downloads: 11 This Week
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  • 9
    Advanced Trigonometry Calculator

    Advanced Trigonometry Calculator

    Open-source C/C++ math engine for advanced scientific computing

    Advanced Trigonometry Calculator (ATC) is an open-source mathematical computing engine written mainly in C/C++. Created in 2011 and maintained by Renato Alexandre dos Santos Freitas, ATC is designed as a practical Windows desktop application for advanced calculations, automation, and technical problem solving. ATC supports equation solving, polynomial tools, complex numbers, matrix calculations, statistics, physics, geometry, unit conversions, DSP/FFT operations, and scripting. It can...
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    Downloads: 18 This Week
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  • 10
    Java Calculator

    Java Calculator

    Supports PEDMAS order of computation and Reverse Polish Notation Gener

    Generates the Reverse Polish Notation (Postfix) expression form of an arithmetic expression in (Infix) form. Performs the computation of the arithmetic expression if Integers or Floating point numbers are used in the expression. Supports PEDMAS order of computation, thus, all the operators of Exponentiation, Division, Multiplication, Addition and Subtraction, as well as using Parentheses for grouping and prioritization is all handled.
    Downloads: 0 This Week
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  • 11

    BD-Func

    Bidirectional Functional Enrichment of Gene Expression Data

    BD-Func is an algorithm to predict activation or inhibition of pathways based upon gene expression patterns. If you use BD-Func, please cite: Warden C, Kanaya N, Chen S, and Yuan Y-C. (2013) BD-Func: A Streamlined Algorithm for Predicting Activation and Inhibition of Pathways. peerJ, 1:e159
    Downloads: 0 This Week
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  • 12
    sRNAWorkbench

    sRNAWorkbench

    The UEA sRNA Workbench

    A suite of tools for analysing small RNA (sRNA) data from Next Generation Sequencing devices. Including expression profiling of known mirco RNA (miRNA), identification of novel miRNA in deep-sequencing data and identification of other interesting landmarks within high-throughput genetic data
    Downloads: 24 This Week
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  • 13

    COHCAP

    City of Hope CpG Island Analysis Pipeline

    COHCAP (City of Hope CpG Island Analysis Pipeline, pronounced "co-cap") is an algorithm to analyze single-nucleotide resolution methylation data (Illumina 450k methylation array, targeted BS-Seq, etc.). Please note: 1) The SourceForge version of COHCAP is no longer being updated. Please see the GitHub version: https://github.com/cwarden45/COHCAP This was the source repository for the Bioconductor version, with some changes after the decision to only provide the code through...
    Downloads: 4 This Week
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  • 14
    PPIXpress

    PPIXpress

    specific protein interaction networks from transcript expression

    Although protein-protein interaction networks are an ubiquitous component of modern systems biology, comparatively few efforts have been made to tailor their topology to the actual cellular condition under study. Since a simple reduction of the networks to the subset of expressed genes only scratches the surface of higher organisms’ regulatory capabilities, we propose the advanced method PPIXpress that allows to exploit expression data at the transcript-level and is thus able to also reveal...
    Downloads: 1 This Week
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  • 15
    Javaluator

    Javaluator

    A java infix evaluator based on "Shunting Yard" algorithm.

    Evaluate an arithmetic expression is as simple as: Double result = new DoubleEvaluator().evaluate("(e^3-1)*sin(pi/4)*ln(pi^2)"). But Javaluator provides you with much more ... Key features: - Functions support, including variable argument count. - Constants support: e, pi, etc ... - Variables support: Example sin(x) for x = pi/4. - Highly configurable: Reduce the built-in operator or function sets, define your own brackets. - Extensible: Define your own grammar, or extends the...
    Downloads: 0 This Week
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  • 16
    DACO-algorithm

    DACO-algorithm

    A novel transcription factor complex prediction algorithm.

    Eukaryotic gene expression is controlled through molecular logic circuits that combine regulatory signals of many different factors. Complexation of transcription factors and other regulatory proteins is a prevailing and highly conserved mechanism of signal integration within critical regulatory pathways and enable to infer controlled genes as well as the exerted regulatory mechanism. We developed DACO (domain-aware cohesiveness optimization), a novel algorithm that combines...
    Downloads: 0 This Week
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  • 17

    mep4j

    Math Expression Parser 4 Java

    Math Expression Parser 4 Java MEP4J is a high performance math expression strings parser for Java (J2SE >= 5). Compare its performance against similiar libraries and let me know your experince. The library manages the 5 operators (+, -, /, %, *) together with the following functions: - "abs" - "cos" - "sin" - "acos" - "asin" - "cosh" - "sinh" - "tan", - "tanh" - "atan" - "sqrt" - "cbrt" - "root" - "log" - "log10" - "log1p" - "exp" - "expm1" - "atan2" - "pow" The library supports variables (case insensitive), custom and pre-loaded ("e" and "pi"). ...
    Downloads: 2 This Week
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  • 18

    MOIRAI

    Simple Scientific Workflow System for CAGE Analysis

    Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data....
    Downloads: 1 This Week
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  • 19
    CalclipseMath

    CalclipseMath

    Java math expression parser and script interpreter

    CalclipseMath – CalM for short – is a math parser written in Java. With a few lines of code CalM enables your application to evaluate user-supplied mathematical expressions, such as "e^(sin .25pi)" and "(sqrt e)^(sqrt 2)". The standard configuration of the parser has a wide variety of mathematical operations, ranging from basic arithmetic, trigonometry, combinatorics, linear algebra and more. CalM includes a script interpreter which is based on the math parser. The CalM scripting language...
    Downloads: 1 This Week
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  • 20

    Discriminative Language Editor

    Discriminative language editor based on ontologies

    Text editor in Java that is able to detect discriminative expressions while the user is typing. When the internal ontology-based analyzer detects a potential discriminative expression the user is advised by underscoring the related words in the text. A descriptive message about the issue is also shown to the user when the cursor is placed over the potential discriminative expression.
    Downloads: 0 This Week
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  • 21
    PANTHER project: software for modeling of protein sequence and function evolution, and tools for applying these data to the analysis of genome data, expression data and coding SNPs. Details available at http://www.pantherdb.org.
    Downloads: 1 This Week
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  • 22

    came

    Identification of chromatin accessibility from NOMe-seq

    Chromatin accessibility plays a key role in epigenetic regulation of gene activation and silencing. Open chromatin regions allow regulatory elements such as transcription factors and polymerases to bind for gene expression while closed chromatin regions prevent the activity of transcriptional machinery. Recently, nucleosome occupancy and methylome sequencing (NOMe-seq) has been developed for simultaneously profiling of chromatin accessibility and DNA methylation on single molecules. However,...
    Downloads: 0 This Week
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  • 23
    EDM Calibration Baseline Fitting

    EDM Calibration Baseline Fitting

    EDMFit is an adjustment tool to estimate EDM calibration parameters.

    An EDM calibration baseline is used to derive specific instrument errors of the electronic distance measurement (EDM) unit of a total station. EDMFit is a simple adjustment tool to estimate the EDM calibration parameters (addition constant and/or scale parameter). The adjustment process is according to ISO 17123-4. The parameters are checked for significance, to avoid an overestimation. Based on two classical hypothesis testing, EDMFit provides a reliable outlier detection. For...
    Downloads: 0 This Week
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  • 24
    This is a parser in Java for Lisp S-expressions. An S-expression or sexp (for symbolic expression) is a convention for representing data using parentheses.
    Downloads: 0 This Week
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  • 25
    A Tool for Retrieval, Visualization and Analysis of biological Pathways. Import a Gene or Protein Set from any Excel file. Automatically find signaling Pathways from KEGG. Integrate your Data in Seconds with a live interactive Force-directed Layout.
    Downloads: 3 This Week
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