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Este projeto objetiva a criação de um Toolbox para utilização de algoritmos de Computação Bioinspirada. O Toobox oferece uma vasta coleção de algoritmos de ferramentas para o projeto de Algoritmos Genéticos e Redes Neurais.
Pocket Cube J3D is a simulator of a Pocket Cube, in Java language and Java 3D graphics API. Java 3D is available at: http://www.oracle.com/technetwork/java/javase/tech/index-jsp-138252.html
DimReduction project provide an open-source multiplatform (Java) graphical environment for bioinformatics problems that supports many feature selection algorithms, pattern recognition techniques, criterion functions and graphic visualization tools.
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GPX2ProfileImage is a Java application that takes gpx files and turns them into elevation profile images. GPX files are created by GPS devices such as the Garmin Edge series bicycle computers, as well as by applications like LoadMyTracks, Ascent.
Fuzzy numbers and basic fuzzy arithmetics (+, -, *, /, 1/x) implementation written in Java. Should be used as a library, but it also has a GUI which demonstrates its capabilities (using SWT widgets).
KADis is a software architecture reconstruction utility, which uitilizes the Knowledge Discovery Meta-Model of the OMG. It uses source nagivator NG for parsing the architecture and enables saving the architecture as an XML file.
Web-as-corpus tools in Java.
* Simple Crawler (and also integration with Nutch and Heritrix)
* HTML cleaner to remove boiler plate code
* Language recognition
* Corpus builder
A java tool for anytime and interactive sequence mining. Aims at providing users with a way of analyzing her activity traces and extract activity schemes from them.
As the famous singer, CALLAS moves emotional and natural interaction into New Media. Its plug-in multimodal Framework allows easy and fast development of Art & Entertainment applications, involving users as active spectators of artistic performances.
cy2reposition: Cytoscape 2 plugin for layout reuse
CyReposition is an open source Cytoscape Plugin for the reuse of existing Cytoscape network layouts in new Cytoscape projects.
This project migrated to github
https://github.com/matthiaskoenig/cy2reposition
Gridnexus provides an easy-to-use graphical interface for collaborating Web Services, Grid (WSRF) Services, local applications, and other operators together in a way that is accessible to a wide-range of applications and users.
Fuzzy logic add-in for OpenOffice.org Calc. InrecoLAN FuzzyMath allows to perform ordinary arithmetic operations and use ordinary mathematical and financial functions with fuzzy numbers. Have any ideas how to improve this project - you are welcome!
PhenoFam is a web-based application that performs gene set enrichment analysis (GSEA) by employing structural and functional information on families of protein domains as annotation terms.
PhyloPattern is a Java/Prolog API, helpful to simulate human reading of phylogenetic trees. Bioinformatician can: annotate trees, apply complex patterns to a tree to search specific architectures or extract information, compare trees with dynamically gen