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DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV
NOTE: please refer to OPPL 2. OPPL is a preprocessor language that allows users to define macros for altering OWL ontologies. The syntax is very simple and intuitive, offering a very abstract and high level "scripting" language, for example for int
Earth3D is a program to display the earth as a 3D globe (including heightfields) in real-time. One can zoom until cities become visible. It uses huge datasets that are loaded on demand over the internet. It is possible to embed dynamic data into the view
Scan, the Semantic Content ANnotator, is a semantic pipeline that helps connecting information extraction tools to semantic database. UIMA-based, it allows easy plugin-writing: information extraction, ontology control, store in RDF Repositories.
SeEvolution is the first application that lets you see the effects of mutation events on 3D models of chromosomes. It takes you on a journey through time, showing you the changes that are necessary to go from the genome of an organism to another.
ERepSim presents an agent-based cloud simulation environment integrating electronic institutions from multiagent research to simulate Internet-of-Services systems.
AliCS is a cognitive software whose main goal is to improve the visibility of information by eliminating the troubles created by the redundancy of symbols.
Collection of Java Applications related to Scientific World. All these applications have their source code available and can be easily changed by other programmers.
Visit http://www.hcroboting.com/ for more information.
NumberMonkey is a calculator written in Java, including basic operations and additional functions; new functions are added with each release. It can be implemented as a standalone desktop application or as an applet within a webpage.
Genome Data Visualization Toolkit (GDVTK) is a Java library for building bioinformatics visualization application. See Bioinformatics, 2004 Mar 22;20(5):727-34. Java-based application framework for visualization of gene regulatory region annotations.
This is a recopilation of programs programmed by Eliot Hijano using either Java or Ruby. All the programs have something in common with both physics and Maths and are explained mathematically and physically in its own pdf.
A platform which hosts battles between Fruit War robots - special java programs. The platform accepts source code as robot, and ranks all robots according to battle result. This project has been totally refined and is now hosted at http://robotypo.appspot.com
This package allows you to create virtual rubik cubes and move their faces. Moreover you can see at every time the current position of the cube and find its solution. Visit http://www.hcroboting.com for more information
This project is Java API to access Unicont Cardio Pager (http://unicont.ru/index2.html) device. This API allows access pager or get ECG data via serial port and through a modem line (using proprietary Windows ActiveX).
ECSKernel is a multiagent coordination algorithm testbed, built on the RoboCupRescue disaster simulation platform. It is easily configurable and can be used with user-generated scenarios.
Représentation Bode (asymptotique et réelle), Nyquist, Black, d'éléments du premier et du second ordre. Le programme est en Java developpé avec NetBeans.
A Java application for drawing dynamic mathematics features (as geometric figures, dynamic algebra) and for creating dynamic animations using geometrics tools. You can also export the figures to Latex2e pstricks, mfpic environment or JPEG, WMF, EPS image
This project aims to develop a parser for Finnish. The parser and the system of grammatical competence assumed herein, are based on the minimalist theory of grammar (Chomsky 1995, 2005) and Bare Lexicon Hypothesis (Brattico, in prep).
DiscriAlign implements a novel algorithm that aligns a set of biological interaction networks.It identifies both functionally conserved and dissimilar regions.
The Research Mapping Tool (RMT) is a citation utility for academics that provides deep searching of online sources for citations/related articles and graphical representation of the links between articles.