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DEPRECATED PROJECT! SolexaTools is becoming the SeqWare project (http://seqware.sourceforge.net) to better reflect its expanded sequencer support. Please go to this project page for code and documentation.
Locky project is a project for research and development of the wireless location information systems. Mainly for tools of gathering WLDB (Wireless Location Database )
Systematic, light-weight, portable recording tool used to easily rate personal or other event properties over time. This application integrally stores user defined data; the profile of which can be viewed or subject to statistical analysis.
This software identifies lateral soil movements during embankment construction and deep excavation for basement construction, which induces additional bending moments, shear forces and deflections in adjacent pile foundations.
EasyGIS simplifies GIS data management, sharing, and publishing. REST interfaces (json, html views). Lucene based FTS searches. Thematic maps, business cartography. Integration with external GIS data providers - Google, OSM.
A demonstration of the result of using an agent based approach in software. Shows a swarm of icons representing agents that follow user selected rules.
JAMBLAST: Java Application Manager for the ncbi BLAST results. It is a graphic application that allow the user to display, filter, sort, import/export, store/manage BLAST results produced with the NOBLAST (https://sourceforge.net/projects/noblast).
A cross platform Open Source implementation of Digi's "Digi Discovery" utility as well as a Java library providing the features of the ADDP (Advanced Digi Discovery Protocol) protocol. The protocol is documented at http://qbeukes.blogspot.com/search/label/advanced%20digi%20discovery%20protocol
LaJolla can perform 3D alignments of RNA and protein structures. It is fast, simple to use and well tested. LaJolla is successfully published in a peer reviewed journal.
!!!!!! PROJECT MOVED TO GITHUB !!!!!!
Please check out http://raphaelbauer.github.io/lajolla/
Mobile Planet Tracking, lets you track the position of any of the 8 planets in the Solar System, you can specify your current earth position, date and time to get the most approximated values.
Quantitative Evalution of Blush: a program to assess myocardial reperfusion on coronary angiograms. This program calculates a value that can be used for risk classification of STEMI patients or as a surrogate endpoint in clinical trials.
CaRMetal is a dynamic geometry software : it provides to the teachers and pupils of primary , secondary school and university an environment which allows to investigate, in a interactive way, the geometrical properties of figures.
JRandO is a test data generator or better test object generator framework. It can be used in JUnit tests or in performance test (for e.g. using JMeter). It may also be useful in anonymization of data or in a simulation environment.
A Simple and Efficient Framework for Infinite Resolution Simulation; provides a Java Thread-like class that executes over simulated time. Time units are user-definable, no time quanta, and neither changes to the VM nor pre-processing are required.
This is a reference implementation of snoBAC, a Bayesian Classifier designed to predict box H/ACA snoRNAs in Caenorhabditis nematode genomes. For details of algorithm and data, see Wang and Ruvinsky (2009) RNA in press.