Showing 4263 open source projects for "bcftools-windows"

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  • 1
    DataMelt

    DataMelt

    Computation and Visualization environment

    DataMelt (or "DMelt") is an environment for numeric computation, data analysis, computational statistics, and data visualization. This Java multiplatform program is integrated with several scripting languages such as Jython (Python), Groovy, JRuby, BeanShell. DMelt can be used to plot functions and data in 2D and 3D, perform statistical tests, data mining, numeric computations, function minimization, linear algebra, solving systems of linear and differential equations. Linear, non-linear...
    Downloads: 4 This Week
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  • 2

    PortdataVisualization

    Diagrammatic visualization of Port data

    This project is a “proof-of-concept” prototype that used diagrammatic visualization for presenting multi-dimensional port data, in relation to local and global events. The visualization emphasizes relations between land-side and wharf-side elements and thus conveys derivable knowledge on labor productivity and efficiency. It can be used to convey commodity flows through the port and state, modes of transport, facilities and their capacities, operational characteristics, intermodal...
    Downloads: 0 This Week
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  • 3

    Divide and Conquer Treemaps

    Divide and Conquer Treemap Visualisation

    The project develops new new techniques and algorithms for quickly partitioning and visualizing very large hierarchical structures within a variety of arbitrary shapes and space using Divide and Conquer approach for Treemaps. Related publications: https://www.sciencedirect.com/science/article/pii/S1045926X1500066X https://dl.acm.org/doi/pdf/10.1145/2493102.2493112
    Downloads: 0 This Week
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  • 4
    Kitchen Garden Aid 2

    Kitchen Garden Aid 2

    Plan out your kitchen garden

    ...Installing it is the easiest way to run KGA on another OS. Kitchen garden aid is primarily tested on java 15, with javafx 15 on windows. If you notice a bug, especially on another OS please report it so I can fix.
    Downloads: 8 This Week
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  • 5
    GPS Datalogger Device Control
    i-Blue 747 / i-Blue 757 / Qstarz BT-Q1000 / i.Trek Z1 / Konet BGL-32 / Holux M-241 / ... control SW (for Java Phones, PalmOS, WinCe (PPC), Java platforms, Windows, Linux, and MacOS). Compatible with most MTK GPS Chipset based loggers.
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    Downloads: 61 This Week
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  • 6
    Java Marine API

    Java Marine API

    NMEA 0183 library for Java

    Java Marine API is an NMEA 0183 library for Java. For furher info and latest source code, see project's Github pages. https://github.com/ktuukkan/marine-api/
    Downloads: 0 This Week
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  • 7
    Jljp

    Jljp

    Calculates the voltage across a liquid junction between two solutions

    An analogous project written in C# can be found here: https://github.com/swharden/JLJP Liquid junction potential calculator. It's a tool for scientists and engineers who have to do with electrochemistry and electrokinetics. When two solutions containing ions are put into contact, possibly through a porous diaphragm, a voltage develops across them. The calculation of the voltage is not trivial. The program is written in Java. Includes classes that can be included in other programs,...
    Downloads: 0 This Week
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  • 8
    GridLAB-D
    GridLAB-D is a new power system simulation tool that provides valuable information to users who design and operate electric power transmission and distribution systems, and to utilities that wish to take advantage of the latest smart grid technology. It incorporates advanced modeling techniques with high-performance algorithms to deliver the latest in end-use load modeling technology integrated with three-phase unbalanced power flow, and retail market systems. Historically, the inability...
    Downloads: 25 This Week
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  • 9
    GeoAPI

    GeoAPI

    Set of Java interfaces for geospatial applications

    The development community in building GIS solutions is sustaining an enormous level of effort. The GeoAPI project aims to reduce duplication and increase interoperability by providing neutral, interface-only APIs derived from OGC/ISO Standards.
    Downloads: 0 This Week
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  • 10
    xRxTx - Uart/Com

    xRxTx - Uart/Com

    Rxtx/Uart GUI

    RxtxConsole is an API and GUI software, developed by Doidx with JSerialCom as the kernel. It can be used for multi- UART/RS232 interface operation. The platform supports Windows/MAC/Linux. Note: Developed with Java17 Follow these steps step by step to apply RxtxConsole, 1. LIST, to obtain all Serial ports currently available on the system. 2. CONNECT, Select a Serial port for connection and place it in the connection pool for use 3. ...
    Downloads: 6 This Week
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  • 11

    BD-Func

    Bidirectional Functional Enrichment of Gene Expression Data

    BD-Func is an algorithm to predict activation or inhibition of pathways based upon gene expression patterns. If you use BD-Func, please cite: Warden C, Kanaya N, Chen S, and Yuan Y-C. (2013) BD-Func: A Streamlined Algorithm for Predicting Activation and Inhibition of Pathways. peerJ, 1:e159
    Downloads: 0 This Week
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  • 12
    Litle spatial viewer

    Litle spatial viewer

    Little spatial viewer for geometries like SDO geometries, WKT and EWKT

    Little spatial viewer for geometries like SDO geometries, WKT and EWKT. You have to copy the string to clipboard and program show you the geometry on the map.
    Downloads: 0 This Week
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  • 13
    Autshumato ITE

    Autshumato ITE

    Free CAT tool based on OmegaT.

    Autshumato Integrated Translation Environment is a free computer aided translation application. It provides a single translation environment that contains translation memory, machine translation and a glossary to facilitate the translation process. The Autshumato ITE is a derived work of the popular OmegaT CAT tool; customised for the South-African environment.
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    Downloads: 2 This Week
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  • 14

    OpenVigil

    Open pharmacovigilance data extraction, mining and analysis tool

    OpenVigil provides a webinterface to analyse pharmacovigilance data, i.e., spontanous or systematic collections of treatments (drugs) and observed adverse events ("drug side effects"). FDA Adverse Event Reporting System (AERS) and other pharmacovigilance data (e.g., Canadian or German) are supported. The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting...
    Downloads: 4 This Week
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  • 15
    StarMap 3D: the project aims to offer a fast and easy consultation of stellar systems
    Downloads: 0 This Week
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  • 16

    LANGANA-E

    LANGANA-E is an English natural language parser

    LANGANA-E is an English natural language parser. It is the main structure that automatic understanding will be built upon. Automatic understanding can be used for answering questions automatically or finding an answer from a reference text archive.
    Downloads: 0 This Week
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  • 17
    JLinAlg
    JLinAlg is an open source and easy to use Java library for linear algebra. It can do calculations without rounding errors. Features include: basic matrix operations, algorithms for solving Linear Equation Systems, inverting matrices, computing the determinant and the eigenvalues of a matrix. We have moved to Github: https://github.com/JLinAlg/JLinAlg
    Downloads: 2 This Week
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  • 18
    BioNLP is an initiative by the University of Colorado Denver Health Sciences Center to create and distribute code, software, and data for applying natural language processing techniques to biomedical texts
    Downloads: 0 This Week
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  • 19
    UIBM (= Universal Individual-Based Model) is an agent-based simulation/3d-dvisualization of the dynamics within multispecies plant communities of Northwest Europe, parameterized from databases using universal scaling laws.
    Downloads: 0 This Week
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  • 20
    awVoronoi

    awVoronoi

    Computes dual structure of 3D additively weighted Voronoi diagrams

    A console application that reads 3D points with weights and computes the dual structure (a set of tetrahedral cells) of the additively weighted Voronoi diagram. The diagrams can be visualized in the Viewer application (Windows only), which can be downloaded separately (Files/Viewer.zip). Viewer is no longer developed. The latest release is 1.0.6.
    Downloads: 0 This Week
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  • 21
    sRNAWorkbench

    sRNAWorkbench

    The UEA sRNA Workbench

    A suite of tools for analysing small RNA (sRNA) data from Next Generation Sequencing devices. Including expression profiling of known mirco RNA (miRNA), identification of novel miRNA in deep-sequencing data and identification of other interesting landmarks within high-throughput genetic data
    Downloads: 8 This Week
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  • 22

    Cylindrical Alignment App

    Arranges alignments in a rotating cylinder

    The Cylindrical Alignment App is the successor to Cylindrical BLAST Viewer. Similarly, it arranges search or other comparisons, against their "axis". Searches can be made by Basic Local Alignment Search Tool, ClustalW, or Gene Machine to name a few. This version does not require downloading or installing Java3D, and has more modern GUI features.
    Downloads: 1 This Week
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  • 23
    mXparser - Math Parser Java C# Library

    mXparser - Math Parser Java C# Library

    A flexible mathematical expressions parser for JAVA, Android, C# .NET

    mXparser is highly flexible parser of math expressions. Software provides easy to use API for JAVA, Android, C# .NET/MONO (CLS). Main functionalities: - basic operators, i.e.: +, -, *, ^, ! - Boolean logic operators i.e.: or, and, xor - binary relations i.e.: =, <, > - math functions (large library of 1-arg, 2-arg, 3-arg - - functions) i.e.: sin, cos, Stirling numbers, log, inverse functions - constants (large library), i.e.: pi, e, golden ratio - n-args functions i.e.: greatest...
    Downloads: 25 This Week
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  • 24
    NNumberGenerator

    NNumberGenerator

    A simple number generator with a user-friendly interface.

    NNumberGenerator is a useful utility for generating random integer and decimal numbers. Requires JDK 19.0.2 at least to run.
    Downloads: 0 This Week
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  • 25
    VANESA
    This project moved to GitHub in 2021 and is available at: https://cbrinkrolf.github.io/VANESA/ This tool is a platform-independent software to create individual pathways and to examine biological networks of distributed, heterogeneous data sources, e.g. KEGG, BRENDA. VANESA also offers Petri net modeling of extended hybrid Petri nets which can be also simulated using the OpenModelica framework.
    Downloads: 0 This Week
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