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  • 1
    ***** Discontinued (direct part of NetLogo now (since NL v6)!) ***** This extension connects the simulation platform NetLogo with the statistical analysis software R. It adds some new primitives to NetLogo, which offers the interchange of data with R and the call of R functions from NetLogo. See the documentation for more details. There is also the possiblity to open an Interactive R Shell from NetLogo. _______________________________________ Please have also a look on our info...
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  • 2
    Open XAL

    Open XAL

    Accelerator Physics Framework

    Open XAL is an open source development environment used for creating accelerator physics applications, scripts and services. This project is a collaboration among SNS, CSNS, ESS, GANIL, TRIUMF and FRIB.
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  • 3

    JUMP Database Query Plugin

    DB Query Plugin for OpenJump

    The JUMP DB Query Plugin is an extension for the OpenJUMP GIS platform that allows OpenJUMP users to give arbitrary database queries to retrieve and display geographic feature sets. Spatial databases currently supported are PostGIS, Oracle Spatial, MySQL, and SpatiaLite.
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  • 4

    JEXTools

    Java software/gui for databasing/batch processing experimental data

    This is the official binary download site. The official site for bug tracking and the code repository is at www.github.com/jaywarrick/JEX
    Downloads: 0 This Week
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  • 5

    physicsmata

    API for all possible cellular automata that work same at all angles

    Its strange how the "sorted pointers" normalizing makes just about any random function, as long as it connects the inputs to the outputs on some path, vibrate as some nonlinear shape of wave. This could be used as a game interface for evolvable musical instruments or fluid puzzle games. Physicsmata is similar in effect to SmoothLife but simpler and pure Java. The cellular automata API takes a function to run at each point. Its parameters are sums of screen brightness (n color dimensions are...
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  • 6
    Nets&Nuts

    Nets&Nuts

    Communicating Vision PLC with Java - Linux server

    This is a Java application which enables the communication among Vision V350 PLC and Linux server without using OPC server. In fact there are two applications: 1- TCP_Server which timely receives data sent from PLC 2- TCP_Client which implements the Unitronics ASCII communication protocol allowing an user read and write any PLC registers of Vision V350 model.
    Downloads: 0 This Week
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  • 7
    Eviewbox is a java imaging suite, its purpose is to view and spread native DICOM medical images and allowing for 2D reconstructions. EViewbox applet will allow to see the DICOM images on every platform.
    Downloads: 1 This Week
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  • 8

    nmea4j

    NMEA libary for java (protocol of GPS devices)

    The aim of this project is to create a full utility suite for NMEA protocols (best known from GPS devices). First goal is a full implemenation of the NMEA 0183 protocol 3.0 (without proprietary extensions). The library provides parsers for NMEA sentences, gpsd-like network daemons and data generators for simulation and testing. This allows advanced sensor handling from cellphones/tablets/laptops with GPS up to vehicles/ships with NMEA sensors on board.
    Downloads: 0 This Week
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  • 9
    Mobile Data Collector (MARITACA)

    Mobile Data Collector (MARITACA)

    Mobile Data Collector for Android devices

    Maritaca easily creates mobile applications for data gathering in Android smartphones. No programming skill is needed. The answers collected are stored in the cloud and can be latter accessed to create statistical data and reports. Try it: http://maritaca.unifesp.br
    Downloads: 0 This Week
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  • 10
    EDM Calibration Baseline Fitting

    EDM Calibration Baseline Fitting

    EDMFit is an adjustment tool to estimate EDM calibration parameters.

    An EDM calibration baseline is used to derive specific instrument errors of the electronic distance measurement (EDM) unit of a total station. EDMFit is a simple adjustment tool to estimate the EDM calibration parameters (addition constant and/or scale parameter). The adjustment process is according to ISO 17123-4. The parameters are checked for significance, to avoid an overestimation. Based on two classical hypothesis testing, EDMFit provides a reliable outlier detection. For...
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  • 11
    OptFerm

    OptFerm

    A computational platform to study fermentation processes

    OptFerm is a computational platform for the simulation and optimization of fermentation processes. The aim of this project is to offer a platform-independent, user-friendly, open-source and extensible environment for Bioengineering process optimization that can be used to increase productivity. This tool is focused in optimizing a feeding trajectory to be fed into a fed-batch bioreactor and to calculate the best concentration of nutrients to initiate the fermentation. Also, contains a...
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  • 12
    Phanto_maJ

    Phanto_maJ

    build three dimensional structure

    PhantomaJ is a software which aims to help users designing complexe three dimensional structures and building phantom banks. This software, implemented as an ImageJ plug-in, has been designed to be intuitive. PhantomaJ is thus "ready to use" for most users, but advanced users can choose to modify specific parameters such as intersection mode, intensity decrease function or virtual real three dimension. In addition, adding a new "basic form" consiste for advanced users to write two short...
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  • 13

    GeneticAlgorithms

    Framework for using the Genetic Algorithms optimization heuristic.

    GeneticAlgorithms is a simple and lightweight framework to implement an optimization heuristic following the Genetic Algorithms model. A genetic algorithm mimics the natural processes of evolution, selection and "survival of the fittest". This framework is intuitive and good integrated with Java 1.5 SDK and later.
    Downloads: 0 This Week
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  • 14
    The Dataverse Network is a Java EE5 app that enables researchers to share data on-line. It provides data citation standards, facilitates preservation, distribution and replication of data, and includes statistical analysis. More at: http://thedata.org
    Downloads: 0 This Week
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  • 15
    Pipes is a desktop system which analyzes an AutoCad(TM) drawing of a sprinkler system, checks for flaws and after these are eliminated, adds the size/diameter labels to the drawing. Tutorial: http://users.norwoodlight.com/janh/wink/autopipes-entry.htm
    Downloads: 1 This Week
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  • 16
    MARF is a general cross-platform framework with a collection of algorithms for audio (voice, speech, and sound) and natural language text analysis and recognition along with sample applications (identification, NLP, etc.) of its use, implemented in Java.
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  • 17

    Logic Calculator

    A Calculator to perform logical operations

    The Logic Calculator is an application useful to perform logical operations. It has three modes: (1) Evaluation of logic formulae: In this mode we have the basic boolean operations (negation, conjunction, disjunction, conditional and biconditional) so the user can insert the logic formula and the Logic Calculator displays the truth table along with the models of the formula. (2) Logical entailment: In this mode the user can insert a number of premises followed by a number of...
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    Downloads: 42 This Week
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  • 18
    Program jobman (Job Manager) glues executables written in different languages according to a given flow. The program can run executables with arguments in parallel (multiprocessed) or in loop or in any combination of them.
    Downloads: 0 This Week
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  • 19
    SECD

    SECD

    Simulador Educacional de Circuitos Digitales

    Educational Digital Circuits Simulator . It tries to be simple for an educational environment. Simulador Educacional de Circuitos Digitales. Intenta tener un uso muy sencillo para ser usado en entornos educacionales.
    Downloads: 4 This Week
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  • 20

    oasis-genomics

    Oasis Genomics cancer omics integration portal

    OASIS is an application that enables complex analytical queries across somatic mutations; copy number changes (CNV); and gene expression data. OASIS has been built on top of the BIoMart frameworks and has been extended to incorporate unique tools and visualizations to facilitate analysis of complex cancer "Omics" datasets.
    Downloads: 0 This Week
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  • 21
    memesa-tools

    memesa-tools

    A collection of tools used in the enumeration of solution spaces

    This collection of tools forms the basis of a pipeline for the complete enumeration of the number of solutions present in a model that maximizes a single objective function.
    Downloads: 0 This Week
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  • 22

    jAgg

    jAgg - Java Aggregation Operations

    jAgg is a Java 5.0 API that supports “group by” operations on Lists of Java objects: aggregate operations such as count, sum, max, min, avg, and many more. It supports Super Aggregation: Rollups, Cube, and Grouping Sets. It supports analytic operations such as lag/lead and row number and more. It also allows custom aggregate and analytic operations.
    Downloads: 0 This Week
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  • 23
    The Protein Similarity Network

    The Protein Similarity Network

    Human protein similarity network used to predict drug safety.

    This is the protein similarity network - PSIN. Here, the nodes are human proteins and they are linked only if they share considerable sequence similarity. We found that this network is particularly useful to distinguish approved from problematic drug-targets. Here you also find the complete set of programs and datasets we used for this purpose. Free to help further test and develop this project. Your help and expertise are much appreciated ! If you have any questions, please do...
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  • 24
    MattsMathTools

    MattsMathTools

    MathTools is an aid in preparing printed math tests.

    Matt's MathTools is a Java application designed as an aid in preparing printed math tests. It is easily embedded in other Java applications or it can be used alone as a single-user desktop app. It includes a scripting environment, numerous demonstration classes and several general utilities. A scripting tutorial is also available.
    Downloads: 0 This Week
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  • 25
    EXMARaLDA
    EXMARaLDA stands for "Extensible Markup Language for Discourse Annotation". It's a system of concepts, data formats and tools for the computer assisted transcription and annotation of spoken language, and the analysis of spoken language corpora. This project's source code has moved to https://github.com/Exmaralda-Org/exmaralda
    Downloads: 0 This Week
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