Showing 4629 open source projects for "project-open"

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  • 1
    The MolTools Java library provides tools for building applications that handle nucleotide sequence data. Features include sequence I/O, handling of lists/databases of sequences, calculation of Tm, and other utilities for sequence design.
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  • 2

    GOBU

    Gene Browsing Utility

    Gene Ontology Browsing Utility (hereinafter, GOBU, pronounced as "go-boo") is a browsing and manipulating tool for Post-Pipeline genetic data, especially useful for data with GO annotations. With help of GOBU, we expect biologists and their cooperating technicians can pay less effort on common programming stuff. At the same time, GOBU provides an Extendable Architecture which guarantees the possibility of 1. Arbitrary Data Description, 2. Data Integration, and 3. Extendable User Interface.
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  • 3
    In addition to RPKM (Reads Per Kbp per Million reads) values, RACKJ computes read counts for exons and splicing events. In so doing, it is feasible to compare two samples and identify genes with most significant difference in exon(splicing)-level.
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  • 4
    MRCube

    MRCube

    Meta-Model Management based on RDFs Revision Reflection

    MRCube is a graphical editing tool of RDF-based contents developed for managing a relationship between RDF and RDFS contents.
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  • 5
    java symbolic computing library and math editor, with : polynomial system solving, vectors & matrices, factorization, derivatives, integrals (rational functions), boolean algebra, simplification, MathML output, java code generation, geometric algebra
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  • 6
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  • 7
    Modell(-bau-)basierte Eisenbahnsteuerung
    Dieses Projekt beinhaltet eine Digitalsteuerung auf Basis des CAN-Bus, Eclipse RCP und AVR-Mikrocontrollern.
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  • 8
    DODDLE-OWL

    DODDLE-OWL

    a Domain Ontology rapiD DeveLopment Environment – OWL extension

    DODDLE-OWL is a domain ontology development tool for the Semantic Web. DODDLE-OWL makes reuse of existing ontologies and supports the semi-automatic construction of taxonomic and other relationships in domain ontologies from documents.
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  • 9
    Krishnamurti's Book of Life D.Thoughts

    Krishnamurti's Book of Life D.Thoughts

    Jiddu Krishnamurti's Book of Life|Libro de la Vida

    FREE distribution of the JAVA-XML multiplatform e-book about Jiddu Krishnamurti's Book of Life (a witty daily cookie-like reflection). Ahora, lea diariamente los pensamientos de Krishnamurti en castellano- Obtenga una agenda gratis.
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  • 10
    Bifurcum

    Bifurcum

    Software to run through a directional graph.

    This software runs through a directional graph and writes the paths it found as test specifications. It has a simple algorithm (Deep First Search with modifications) and allows sorting children before traversing. This application sums up the authors 4-years experience when programming a commercial tool for graph traversing (which used a much more advanced algorithm) and coaching its users. Technically it is a front end for the library Bifurcumlib.
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  • 11
    open_data_assimilation
    Generic data-assimilation toolbox written in java, with native (c and fortran) libraries for high performance computing. Provides tools to couple to your own model and a wide range of algorithms, ranging from parameter calibration to Kalman filters.
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  • 12
    Ket

    Ket

    An algebra editor

    A text editor for maths. Simple algebra should be faster and more intuitive to perform on a computer than on paper and should look like maths. Write small fragments in plain text; perform simple click-and-drag algebra with the mouse; and explore more involved algebra through keyboard shortcuts. When done, save as plain text files or export to LaTeX and HTML.
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  • 13
    GATE
    NOTE THAT THE SOURCE CODE AND ISSUE TRACKER HAVE NOW MOVED TO GITHUB. FIND US AT https://github.com/GateNLP/ GATE (General Architecture for Text Engineering) is an architecture, framework and development environment for developing, evaluating and embedding Human Language Technology. See http://gate.ac.uk for full details.
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  • 14
    WxTools (Weather Data Tools)

    WxTools (Weather Data Tools)

    This package collects Fine Offset and Oregon Scientific weather data.

    WxTools (Weather Data Tool Suite) is a collection of software for collecting and displaying weather data from various weather stations. The software works with the Fine Offset WH290 and similar models (including clones such as the Pro-Signal PSG04173). It also works with the Oregon Scientific WMR180 weather station (and probably similar models such as the WMR88 and WMR100) as well as the older WMR928. Sample weather data is provided.
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  • 15
    JMEScriptGUI

    JMEScriptGUI

    Pequeño IDE para el lenguaje JMEScript.

    Con este IDE podrá probar cualquier script escrito en JMEScript con toda la funcionalidad del lenguaje, incluidos gráficos 2D y conexión MySQL. La versión para Android, en este momento, tiene menos funcionalidad y ejecuta la versión 0.1 de JMEScript. Parser JME y lenguaje JMEScript en https://sourceforge.net/projects/jme/ Documentación en https://morenobarrientos-jme.site44.com/ Código fuente y UDL para Notepad++ en pestaña 'FILES'
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  • 16
    No-code system is for the visual creation of structural-functional models and the automatic generation of R language simulation models. The program can be used to describe information, production, organizational, and other processes. For graphical representation, the EdPM/EPM notation is used, which allowed us to implement: - structural-functional modeling using graphical methods; - the study of the efficiency of structural-functional models using simulation methods, that allow (e.g....
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  • 17

    Billiards Covers

    This zip jar contains the current coverings of periodic paths.

    Researchers, Mathematicians and Enthusiasts. Download "Billiards Covers" to see the most current list of periodic paths in triangles. Download "Billiards Everything" to discover new periodic billiard paths, an unresolved problem from 1775! Follow "The Great Periodic Path Hunt" at gwtokarsky.github.io for the latest news. Email tokarsky@ualberta.ca for feedback.
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  • 18
    JRC QSAR Model Database

    JRC QSAR Model Database

    (Q)SAR Model Reporting Format Inventory

    In the regulatory assessment of chemicals (e.g. under REACH), Quantitative Structure Activity Models (QSAR) are playing an increasingly important role in predicting properties for hazard and risk assessment. This implies both a need to be able to identify relevant QSARs and to use them to derive estimates and/or have access to their precalculated estimates. To help meet these needs, the JRC QSAR Model Database is established and freely accessible through http://qsardb.jrc.ec.europa.eu/qmrf...
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  • 19
    Autoplot

    Autoplot

    Autoplot is an interactive browser for data on the web

    Autoplot is an interactive browser for data on the web. Give Autoplot a URL or local file name and it creates a sensible plot of the data. Autoplot allows you to interactively browse data stored in ascii, .cdf, netcdf, and many other formats. Autoplot's source has been moved to GitHub. Thanks to SourceForge for many years of hosting!
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  • 20
    Resolver

    Resolver

    A general purpose high precision conversion utility for Java

    This is a Java port of my C++ conversion utility from Geodesica-SFX. Currently only Lengths and Areas are implemented. User can enter fractional or decimal values and set the number of divisions for the following...
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  • 21
    Thinknowlogy

    Thinknowlogy

    The world's only naturally intelligent knowledge technology

    Natural intelligence is the utilization of naturally occurring logic. This naturally occurring logic provides concrete clues for organizing natural objects, like: - Grouping objects that belong together, - Separating objects that don't belong together, - Archiving objects that have become less important. Natural language and spatial information are sources of natural intelligence: - Natural language is providing concrete logic for organizing knowledge objects, - Spatial...
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  • 22
    PI-Based Image Encoder / Converter

    PI-Based Image Encoder / Converter

    Python code able to convert / compress image to PI (3.14, π) Indexes

    Image processing tool that encodes pixel data as indices within the first 16.7 million digits of PI (π). Features high-performance Numba-accelerated search and a signature 'film-grain' aesthetic upon reconstruction. ZIP also include 16 MB file with 16,7 mil numbers of PI Benchmark(Single-Thread): Hardware & Environment Apple Silicon: Apple M2 (Mac mini/MacBook) x86_64 Platform: Intel Core Ultra 5 225F (Arrow Lake, 10 Cores) OS 1: Fedora 43 (GNOME) OS 2: Windows 11 Pro...
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  • 23
    JME (Java Math Expression)

    JME (Java Math Expression)

    Evaluador de expresiones matemáticas para Java en español

    Biblioteca para Java que implementa un potente evaluador matemático en español y un lenguaje estructurado de script, JMEScript, que hace uso de éste. Puede evaluar expresiones altamente complejas, que incluyen; * vectores * matrices * números complejos * números enteros y reales de precisión arbitraria, * expresiones booleanas * conjuntos * cadenas * diccionarios * grafos * correspondencias y relaciones finitas Permite especificar operaciones y funciones definidas por el...
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  • 24

    multinotes

    Text architecture for music theory.

    ...LilyPond, PostScript, etc.) and addresses these issues. An overview about the software architecture and its operation is given in: Journal of the Text Encoding Initiative, Open Issue 18/2024: "Using d2d for Writing XML --- The multiNotes Text Architecture for Musical Analysis" https://doi.org/10.4000/132ex
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  • 25

    rssfiz

    Java science library.

    Java science library. Project contains modules for physics units, particle and quantum physics, molecule, chemistry and universe definitions, also additional math classes.
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