Showing 1512 open source projects for "alpha"

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  • 1
    MD PnP | OpenICE

    MD PnP | OpenICE

    Open Source Integrated Clinical Environment

    As of 2015-06-23, this project may now be found at http://www.github.com/mdpnp/mdpnp. A prototype reference implementation of the standard for the Integrated Clinical Environment (ASTM F2761-2009)
    Downloads: 0 This Week
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  • 2

    Usul

    Foundation bolt load for Pressure Vessel

    Downloads: 0 This Week
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  • 3
    zet-evacuation
    Moved to GitHub. This is the old, unmaintained source code. https://github.com/zet-evacuation A tool to model and simulate evacuation situations in buildings using flows on graphs and cellular automatons. It allows visualization of both models in OpenGL.
    Downloads: 0 This Week
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  • 4

    Drug Extraction

    Drug name extraction

    Drug name recognition and normalisation/grounding to DrugBank ids and standard names. Package provides 2 taggers: 1. DrugTagger - CRF-based with DrugBank presence feature (see feature set for details). 2. DrugnameGazetteer - gazetteer/dictionary-based. Dictionary created from DrugBank.ca database. Both taggers include grounding/normalisation to DrugBank ids and standard names. Feature set: Word, Word-1, Word+1, Word-1_Word, Word_Word+1, DrugBankPresence, POS DrugBankPresence...
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  • 5
    JPOP is a pure java parallel optimization package based on the Optimization Java Package. It supports analytical gradients and Hessians for non-linear optimization. JPOP is based on uncmin in Fortran but employs java arrays and object oriented code.
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  • 6
    SoftSmithy is a platform for open source Java developers. The core is an extended Java utility library. In the future there may be open source software build on this library.
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  • 7
    MathOCR

    MathOCR

    A printed document recognition system that can deal with formula

    MathOCR try to recognize printed scientific document including mathematical formula , result is available in LaTeX and HTML.
    Downloads: 1 This Week
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  • 8
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated...
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  • 9
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  • 10
    FoodDiary

    FoodDiary

    FoodDiary is an app, that tracks what you have eaten.

    FoodDiary is an mobile app, that helps you, tracking what you have eaten in order to stay fit ;). A foodlist is available, that gets updated as often, as possible, and every user has the ability to add and correct data. An activity list is available in order to track, how many calories you have burned. There is also an biodata recording included, that helps tracking your personal goals.
    Downloads: 0 This Week
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  • 11
    Revolution Java Libraries

    Revolution Java Libraries

    Java libraries for creating applications

    Revolution Java libraries are downloadable .jar files used for creating applications. They are designed specifically for creating agent-based modelling applications. revolution.jar Contains the basic classes need to create an application. revolution-apps.jar Extends revolution.jar with a number of in-built application templates.
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  • 12

    gametes

    Generate complex SNP models and heterogeneous datasets

    Genetic Architecture Model Emulator for Testing and Evaluating Software (GAMETES) is an algorithm for the generation of complex single nucleotide polymorphism (SNP) models for simulated association studies. GAMETES is designed to generate epistatic models which we refer to as pure and strict, that constitute the worst-case in terms of detecting disease associations, since such associations may only be observed if all n-loci are included in the disease model. User friendly GAMETES software...
    Downloads: 2 This Week
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  • 13
    Stemmer Gujarati

    Stemmer Gujarati

    Offline stemmer for Gujarati , which is one of 22 Indian languages.

    This is a Gujarati stemmer in Java. Stemming is a process in which affixes are removed form the root word (stem). It relates morphological variant words to corresponding common root. For example "પ્રતિઉપયોગી" is word which has stem " ઉપયોગ". Stemmers are language specific tools. The design of a stemming algorithm requires a significant level of linguistic expertise. There has been lot of significant work in the development and evaluation of stemmer for non-Indian languages, but very less...
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  • 14
    CellCompiler
    The target system of this project is to develop mathematically efficient program code generator from cellml like biological models described by mathematical markup languages.
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  • 15

    jMDFLib

    This is a small Java library which reads MDF Files up to Version 3.00

    This Library for Java shall enable developers to use (at first read, maybe later writer) MDF Files, as described by the Format Specification MDF Format by Vector Informatics. The MDF file format is widely used in automotive engineering and other fields for the recording of measurement data. This Java library parses MDF files and enables different kind of read access. If this library is not helpful for a particular purpose it can at least be used to see how the parsing (and therefore...
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  • 16

    Immutable Sparse Wave Trees (WaveTree)

    Realtime bigdata tool for bit strings up to 2^63 based on AVL forest

    Realtime bigdata tool at the bit level based on immutable AVL forest which can be run in memory or, in future versions, as a merkle forest like a blockchain. Main object is a sparse bit string (Bits) that efficiently scales up to 2^63 bits normally compressed as forest has duplicated substrings. Bits objects support reading bit, byte, short, int, or long (Java primitives) at any bit index in 64 bit range. Example: instead of building a class to hold a header and then data, represent all of...
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  • 17
    ASDN - "Agile Supply Demand Networks" is software for analyzing and developing logistics networks.
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  • 18
    Toolboxes for SPM (http://www.fil.ion.ucl.ac.uk/spm/) developed at Freiburg Brain Imaging (http://fbi.uniklinik-freiburg.de/)
    Downloads: 0 This Week
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  • 19
    A version aware Java API to Ensembl data systems.
    Downloads: 0 This Week
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  • 20

    invertsort

    this procect to use invert .text file using java

    this procect to use invert .text file using java
    Downloads: 0 This Week
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  • 21
    openCDT

    openCDT

    openCDT is a conceptual design tool for aircraft design

    Downloads: 2 This Week
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  • 22
    Wrapper for vendors to simplify usage of the Java Speech API (JSR 113). Note that the spec is an untested early access and that there may be changes in the API.
    Downloads: 1 This Week
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  • 23
    XBM

    XBM

    eXtensible Behavioral Modeling (XBM) framework

    Impact Computing's eXtensible Behavioral Modeling (XBM) framework is an open, flexible and customizable platform providing integrated access to an extensible hybrid combination of modeling, simulation and visualization tools.
    Downloads: 0 This Week
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  • 24
    Cardiac Atlas Project
    The aim of the cardiac atlas project is to establish a structural and functional atlas of the heart. This project is funded by the NIH grant and led by the University of Auckland, New Zealand.
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  • 25
    qPMerge

    qPMerge

    phospho-peptide merge tools for Galaxy

    Downloads: 0 This Week
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