Showing 4549 open source projects for "open-shell"

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  • 1
    BeamFlow

    BeamFlow

    A electric, magnetic, and gravity field physics presentation program

    BeamFlow is a scientific presentation and demonstration program for typical introductory physics problems involving electric, magnetic, and gravity fields in three dimensions. Real-time demonstration of the magnetic field around a wire, the gravity fields around rotating binary stars, and the electric field from multiple point charges are just some of the potential applications.
    Downloads: 0 This Week
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  • 2

    mPSQed

    Alignment editor and multiplex pyrosequencing assay designer

    Molecular-based diagnostic assays are the gold standard for infectious diseases today, since they allow a rapid and sensitive identification and typing of various pathogens. While PCR can be designed to be specific for a certain pathogen, a subsequent sequence analysis is frequently required for confirmation or typing. The design of appropriate PCR-based assays is a complex task, especially when conserved discriminating polymorphisms are rare or if the number of types which need to be...
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  • 3
    Evoker is a graphical tool for plotting genotype intensity data in order to assess quality of genotype calls. It implements a compact, binary format which allows rapid access to data, even with hundreds of thousands of observations. PLEASE NOTE: This source repository is no longer active. See the github link above for the latest version.
    Downloads: 0 This Week
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  • 4
    Bracer

    Bracer

    Repository has been moved to: http://dtitov.github.com/bracer

    Java library for parsing and evaluating math expressions. Javadoc is available at http://bracer.sourceforge.net/javadoc/ P.S. This library depends on Apache Commons Math, so don't forget to include commons-math-2.2.jar to your project.
    Downloads: 0 This Week
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  • 5

    openTether

    gui for libgphoto2 free tethering and hdr shooting linux

    A gui for libgPhoto2 on linux. This gives free camera tethering. Features: set ISO - f-stop - shutterspeed * Time lapse * Very detailled HDR schooting. This project aims to bring tethering in a free and userfriendly manner.
    Downloads: 0 This Week
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  • 6
    rNA is an aligner for short reads produced by Next Generation Sequencers
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  • 7
    GpsPrune is a java application to view and manage coordinate data, eg from GPS units. With it you can load a variety of text and Xml formats, view the data (in 2d and 3d), edit and convert the data, correlate photos and audio, create charts and more.
    Downloads: 2 This Week
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  • 8
    The Aglets Software Development Kit (ASDK) is a framework and environment for developing and running mobile agents. Mobile Agents are a type of software agents that have the unique ability to transport themselves from one system to another. Doing so, an
    Downloads: 7 This Week
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  • 9
    TRMSim-WSN
    TRMSim-WSN (Trust and Reputation Models Simulator for Wireless Sensor Networks) is a Java-based simulator aimed to test Trust and Reputation models for WSNs. It provides several Trust and Reputation models and new ones can be easily added.
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    Downloads: 0 This Week
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  • 10
    SemaRule Navigator
    SemaRule Navigator is an Integrated Suite of Open-Source and Free-License Software, placing Semantic and Text Analysis Technologies in the toolbox of Researchers, Students, and Enterprises.
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  • 11
    SweetOnionCCG2PTBConverter

    SweetOnionCCG2PTBConverter

    A tool that converts CCGBank to PTB

    Conversion between different grammar frameworks is of great importance to comparative performance analysis of the parsers developed on them. This tool can convert CCG derivations to PTB trees by using Max Entropy models as well as visualizing the tree graphs. The main technical innovation presented here is the effective conversion method which achieves a F score over 95%.
    Downloads: 0 This Week
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  • 12
    JeeObserver is an open source java monitoring tool used to analyze java applications and servers performance. It can monitor servlets, JSF actions, EJB beans, JVM cpu and memory usage and HTTP sessions. Full documentation at www.jeeobserver.com
    Downloads: 0 This Week
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  • 13
    Ruleminer is an experimental tool for performing various data-mining tasks, especially focused on searching for association rules. The aim is to research the association rules mining process and to develop new approaches for solving the related problems.
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  • 14
    The software is related to the PhD thesis of Zoltán Farkas, used to simulate work distribution and processing in hierarchical desktop grid systems.
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  • 15
    jCircuits

    jCircuits

    An easy-to-use Simulation of Hardware-Gates

    A very easy-to-use but complex Gate-Simulation.You can simulate various gatters like AND, NAND, OR, NOR, NOT, XOR. And also build Flip-Flops, Full Adders and other compley structures. In other words its a register-Transfer Simulation of Hardware-Processes. There are also 2 Applet-Versions - the full Version and a only-Display-Version ---------- USEFUL TIPS: ---------- Always enter the Edit-Mode (swiss knife) bevor editing something ;) [!! IMPORTANT !!] Try out the...
    Downloads: 1 This Week
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  • 16
    Index biological data (genbank sheets, Uniprot...) in a Solr indexer, with index shard support and provides a query interface. Project goal is to create a virtual image with indexer and web interface to query and visualize biological data.
    Downloads: 0 This Week
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  • 17

    mathrefplugin

    A plugin for JabRef

    A plugin for JabRef. The plugin queries Zentralblatt MATH reference entries using the BibTeX format.
    Downloads: 0 This Week
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  • 18

    OpenMCD

    Eclipse debugging tools for ecu development

    OpenMCD wants to become a top-class collection of open source, eclipse based development and debugging tools for the development of electronic control units (ECUs). MCD stands for measurement, calibration and diagnostics: three activities often performed during the development of software for embedded and mechatronic systems.
    Downloads: 0 This Week
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  • 19

    Scicoslab Graphic Editor

    Graphic Editor for Scicoslab

    Graphic Editor for Scicoslab developed in Java with a 2D graphic editor and XML file output.
    Downloads: 0 This Week
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  • 20
    This project aims the requirement of managed informations / documents in the treatment of patients, i.e. integrated care. The underlaying data model implements standards of electronic health recording, the project is based on a SQL db and Java EE framework. This is currently a student driven project for educational purposes.
    Downloads: 0 This Week
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  • 21
    JFinisher

    JFinisher

    JFinisher is software for alignment, editing and manipulation DNA seqs

    JFinisher is software for alignment, editing and manipulation of biological sequences. It aims to assist in the finishing of genome assembly. Starting from a reference sequence, the program align contigs using Smith-Waterman local alignment algoritm with auxiliary methods, allowing management of the alignments generated. It has graphical interface for manipulation and visualization of the actions, uniting features that help in editing the sequences. It has internal projects manageable and...
    Downloads: 0 This Week
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  • 22
    Gavrog stands for "Generation, Analysis and Visualization of Reticular Ornaments using Gavrog". It is a Java library together with a suite of interactive applications for the study of periodic net-like structures in space and their applications.
    Downloads: 7 This Week
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  • 23
    J3calc

    J3calc

    Java Calculator

    J³calc was initially a little project for my school but I enhanced it on and on and now it is a quite powerful calculator. It is written in Java with Swing. The sourcecode is open under the GPL 3.0 license
    Downloads: 0 This Week
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  • 24
    JSpoor is a utility software for logging and recording of user interface events and actions during working sessions of users with a Java/Swing Software. It captures and records both high level (semantic) actions and low level actions such as mouse moves.
    Downloads: 0 This Week
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  • 25
    Nen

    Nen

    neural network implementation in java

    3-layer neural network for regression and classification with sigmoid activation function and command line interface similar to LibSVM. Quick Start: "java -jar nen.jar"
    Downloads: 0 This Week
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