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Cloe (Closure Editor) is a graphical, Java based tool used for editing contigs, resolving contig features, and closing both sequencing and physical gaps.
EvSIG es un editor de Map Files compatibles con mapserver, desarrollado en Java, que permite, la edicion completa de un Mapa, sin tener que tocar el Codigo de Configuracion del Map File, en resumen una GUI para MapServer, Es un proyecto Personal de J
ChiBE (Chisio BioPAX Editor) is an open source pathway editor for biological pathways in BioPAX format. ChiBE converts BioPAX graphs into process diagrams where complexes and compartments are represented with compound nodes.
!!! For latest version, please see !!!
http://code.google.com/p/chibe
CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74
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DragMath is a drag and drop equation editor in the form of a Java applet. Once an expression is created the user can convert it into a variety of different linear syntax for mathematics, including MathML, LaTeX, Maple, Maxima or any user defined style.
PLEASE NOTE: active code development has moved to GitHub.
https://github.com/maths/dragmath
The MIG Editor is a geographical metadata editor that implements a subset of the 19115, 19119 and 19139 ISO formats. Based in the Portuguese Metadata Profile and INSPIRE requirements.
The Edinburgh Pathway Editor (EPE) is a tool and framework that allows the drawing and manipulation of Biological Networks, such as signalling or matabolic pathways. The editor supports several notations including SBGN and Cytoscape notations.
The purpose of this project is to develop ontology-based tools for the study of animal behavior (ethology). The goal is not to produce a general ontology or editor, but comparative methods
and (behavior) data entry tools (ethontos and owlwatcher).
PORIS toolkit allows describing graph-based systems and their behavior in a snapshot. It provides a web
editor for a domain visual specific language (DSL) and transformation tools to generate software prototypes, system configurations, ...
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Optex Analyzer is a software to analyze and compare algorithms to solve approximately optimization problems. It has a GUI that allows select a set of input files containing raw algorithm results. The analysis is shown with tables and charts.
SPASE Model is a collection of tools for working with the structured data model information. Tools can convert the relational version of the data model into various expressions, including XSD, XMI and PDF documentation.
Automata Based Programming Tool for implementing logic for J2SE, J2EE and Sybmian applications. Consists of Java FSM Framework and Eclipse Plugin parts. Plugin implements UML model editor, visual debugger, validator, compiler and interpreter for Eclipse
powerPlant is a plant modelling tool based on parametric plant descriptions, producing highly detailed models that can be exported to 3ds. Deriving similar plants is a matter of 1 click! Complete scenes can be composited with the integrated scene editor.
J2dPathway project are composed of several packages: J2dPathway(biological pathway viewer), Pyrus Pathway Editor (biological CAD), and DNASequenceViewer (platform-independent sequence viewer).
A program for organizing and commenting textual citations from texts (books, articles or other published works) for use in producing scientific or academic publications. Works together with EndNote, RefWorks and BibTeX. Exports to PDF and Word (RTF).
The OpenNLP Interlinear Glossed Text (IGT) Editor software supports transcriptions and interlinear glosses for language documentation with semi-automated annotation.
JFlightLog is a FREE, graphical pilot log for Ms Windows and others(it's java). Saves as Excel XLS, PDF, CSV or TXT. Imports CSV from other logbook programs or spreadsheets. Prints entries directly. Auto-creates charts for visualizing flight times.