Showing 4549 open source projects for "open-shell"

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  • 1
    Euklid is a program to analyse and simulate geometric shapes interactively in 2 and 3 dimensions.
    Downloads: 0 This Week
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  • 2
    PACS VM

    PACS VM

    ISO - Customized version of dcm4chee 2.17.3 for MySQL.

    1. Add JBoss Application Server 4.2.3.GA for JDK 6. 2. Cleanup for Windows and deprecated files. 3. Off CONSOLE records - http://forums.dcm4che.org/jiveforums/thread.jspa?messageID=4787
    Downloads: 1 This Week
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  • 3
    Then it is examined whether this number is a prime number. All computations are distributed over several computing servers. In the futer scientific computations will also become possible. The computations are supervised by a central monitor. -Active Dire
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  • 4

    Open Rocket Toolkit

    Simulation of historical and contemporary launch vehicles

    ORT is a tool for modelling and flying launch vehicles of arbitrary size and complexity. Unlike OpenRocket, it does not focus on amateur rockets but on real-world launch vehicles. The bundle includes a graphical design tool with an integrated simulation engine for rocket launches. Also included in the bundle is a playback application and a headless driver for logging simulations into spreadsheets. ORT integrates JME3 for 3D rendering.
    Downloads: 0 This Week
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    DeNovoCheck

    DeNovoCheck: Inheritance analysis for NGS trio data

    DeNovoCheck is intended to be used for inheritance analysis in NGS tio data. For rare dominant Mendelian diseases, patient-parent trios are often used to reduce the number of candidate variants. The algorithm bases the inheritance prediction on the data available in the parental BAM files and allows for a fast and reliable selection of potential de novo variants.
    Downloads: 0 This Week
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  • 6

    PathMEN

    A Java tool for mining pathway mentions from literature

    PathNER is a tool for the identification of specific pathway mentions from biomedical literature. PathNER is built upon the GATE embedded framework.It's based on soft dictionary matching and rules-based detection. The dictionary is generated from ConsensusPathDB and Pathway Ontology and the rules are implemented in JAPE. Using PathNER, you can identify all occurrences of informative pathway names (e.g. 'the Wnt pathway'). PathNER can be used to assist studies that aim at uncovering...
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  • 7
    Based on HL7 v.2.3.1 Orders & Results Reference Information Model (RIM)s, The project is NOT a CPOE per-se. Instead, the project provides "applications" that allow EHR's to perform Outpatient Orders and Results via HIE, and collect these into their EHRs to feed the EHR "CPOE module / section" (ex. with prescribed drugs, ordered labs and results, ....) The first module in the project was the "ePrescribing application"; certified by RxHub and SureScripts back in 2007. New...
    Downloads: 0 This Week
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  • 8
    openSCADA

    openSCADA

    openSCADA® is an open source SCADA system written in JAVA

    openSCADA is an open source Supervisory Control And Data Acquisition System. It is platform independent and based on a modern system design that provides security and flexibility at the same time. openSCADA is flexible. It is not an out of the box solution, but a set of tools that can be combined in many different ways. It provides development libraries, interface applications, mass configuration tools, front-end and back-end applications.
    Downloads: 11 This Week
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  • 9
    CapCode is a navigation software for sailors for cruising or regatta. - Reads NMEA 183 data (instruments, GPS, AIS). Implements computation of the VMG , tracing on RNC and ENC (S-57) charts. Display the polar on the chart, future position of the ship. Weather information acquired from grib files are also displayed in the navigation view. developed as an Eclipse RCP in its versions 2.x.x
    Downloads: 12 This Week
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  • 10
    MathParser Java - Math Parser library

    MathParser Java - Math Parser library

    Mathematical Parser for Java

    This project gives a mathematical parser for converting a simple string expression into a result which can be managed for using in other calculations, all in Java. Using a couple lines of code, you'll be able to parse complex arithmetic expressions efficiently. This library is powered by Dijkstra's Shuting-yard algorithm. The library has no dependencies with other external libraries. Dependency <dependency> <groupId>com.google.code.mathparser-java</groupId> ...
    Downloads: 0 This Week
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  • 11
    Geographic Information System Development Platform build on Netbeans RCP using GeotoolKit.org library.
    Downloads: 0 This Week
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  • 12

    NetBeans Dictionaries

    Additional dictionary files for the NetBeans spellchecker.

    Additional dictionary files for the NetBeans spellchecker.
    Downloads: 1 This Week
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  • 13

    gocad-projector

    Java utility used to reproject GOCAD objects between map projections

    Downloads: 1 This Week
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  • 14
    Command line fibonacci series calculation program.
    Downloads: 0 This Week
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  • 15

    BinBase

    BinBase is a software for the automatic analysis of Massspec data from

    BinBase is a software for the automatic analysis of Massspec data from LECO GC-Tofs. All code and documentation has been moved to the google code site of this project: https://code.google.com/p/binbase/ And support is provided by the company coding and more, which can be reached under: contact@codingandmore.org
    Downloads: 0 This Week
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  • 16
    Conzilla is a concept browser. It browses and edits 'context-maps', a construct similar to conceptual models, UML diagrams or mind-maps. Conzilla uses RDF to describe and distribute such models.
    Downloads: 0 This Week
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  • 17

    mobycore

    The lightweight java library that implements BioMOBY protocol

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  • 18
    The Systems Biology Ontology project (SBO) goal is to develop controlled vocabularies and ontologies tailored specifically for the kinds of problems being faced in Systems Biology, especially in the context of computational modeling. !!!! Important Announcement !!!! We have moved the curation and development of Systems Biology Ontology (SBO) to a git-hub repository https://github.com/EBI-BioModels/SBO. Hence, this SourceForge SBO project has also been retired. Please use the Git-Hub...
    Downloads: 0 This Week
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  • 19

    cnvHiTSeq

    cnvHiTSeq is a set of tools for detecting CNVs using sequencing data.

    cnvHiTSeq is a set of Java-based command-line tools for detecting Copy Number Variants (CNVs) using next-generation sequencing data. cnvHiTSeq uses standard BAM files as input.
    Downloads: 0 This Week
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  • 20

    Math Simulator

    A simulation software for numerical techniques.

    Math Simulator is a java-based application which simulates various mathematical techniques.It is extremely useful for the Engineering students and for professionals. Most importantly, unlike most others Math Simulator is an Application rather than a java - library. So, user is not required to have any computer background. A Unique feature of Math Simulator is that it allows you to save queries for later reference. Hence you can save the problems along with their results.
    Downloads: 0 This Week
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  • 21
    BMDExpress is a bioinformatics tool used to analyze microarray dose-response data. The analysis provides benchmark dose estimates at which different cellular processes are altered in toxicogenomic experiments.
    Downloads: 1 This Week
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  • 22
    SkyJUMP is an open source GIS program for the creation and use of facility maps and data on small to medium sized areas such as cities or military bases. It is written in Java and based on JUMP from Vivid Solutions.
    Downloads: 0 This Week
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  • 23
    CoSyne Integrated Prototype
    Multilingual Content Synchronization with Wikis: CoSyne is a Research and Technological Development project co-funded by the European Union. Details: http://cosyne.eu
    Downloads: 0 This Week
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  • 24
    GEPETTO - Gene Prioritization in Java

    GEPETTO - Gene Prioritization in Java

    GEPETTO (GEne Prioritization ExTended TOol)

    GEPETTO (GEne PrioriTization ExTended TOol) is an original open-source framework, distributed under the LGPL license, for gene selection and prioritization on a desktop computer that ensures confidentiality of personal data. It takes advantage of the data integration capabilities in the SM2PH-Central Framework(KD4v,MSV3d,BIRD,..), combined with in-house developed gene prioritization methods. It currently incorporates six prioritization modules, based on gene sequence, protein-protein interactions, gene expression, disease-causing probabilities, genomic context). ...
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  • 25
    CloudAligner
    A map/reduce based application for mapping short reads generated by the next-generation sequencing machines.
    Downloads: 0 This Week
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