Indivo is a distributed, web-based, personally controlled health record system that is accessible to the nomadic user and built to public standards. The Indivo project includes a pluggable web services API, web-based UI, data subscription framework, etc.
Plantra-Trajectory Planning is a software to rebuild surfaces from cloud points, featuring shaded 3D visualization and path planning for robotics paths. It uses Voronoi diagram, Cyrus-Beck clipping, Delaunay triangulation and B-Splines.
The Genomic Diversity and Phenotype Connection (GDPC) written in JAVA uses web services to make XML formatted data publicly available. The GDPC Browser (front-end GUI) can access these services, and other applications can use the API.
JPhysChem - a mathematical modeling toolbox designed to provide an abstract layer and a comprehensive graphical front-end for general model building and specific modeling and data processing in the field of mass spectrometry and physical chemistry.
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Tool to extract data from a GlobalSat DG-100 GPS data logger and store the data in GPX format. It also can send configuration data to the device, delete stored data and switch the device to GPS-mouse mode.
Computer-Aided Boat-Design software written in java. Create Hard-chined hull by moving points with basic hydrostatic calculations. A set of examples are provided, export DXF & VRML and row data are enables. Plans can be printed.
BDD-Based Deductive Database, an implementation of Datalog that uses Binary Decision Diagrams as the underlying data structure. This allows it to represent exponentially-sized relations efficiently.
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GSCope3 performs microarray data analysis to find correlations between BLSOM clusters and any form of omic knowledge expressed in OSML. Includes example metabolic pathway, gene ontology, genome position, transcription and PPI knowledge in OSML format.
Facelift is a visualization and analysis software for online social networking services. It displays a given community as a node-link diagram and provides several search / filtering functions as well as cluster analysis features.
A visualization of the fourier transform applied to sound data. Analyzes a time-domain sound sample using the Fourier Transform, and graphically displays the results and sound in real time. Attempts to audio into sheet music.
Spectre for mass spectrometry. (Quantitiave) analysis of multiple ls-ms(ms) runs, using mzXML import of raw data. (working on mzDATA). Provides filters, alignment- and export tools.
The Genomic Diversity and Phenotype Data Model (GDPDM) captures molecular and phenotypic diversity data. MySQL databases are used to implement the schema. This project develops software tools (written in Java, Perl, etc.) associated with this model.
Visual Turing Machine is a tool for visually designing Turing machines. This means no coding in abstract scripting languages, but simple point&click design. It uses the a..z symbol set, plus the "empty" # symbol, and also simulates an infinite tape.
The Patient and Sample System for Information Management (PASSIM) is a system for annotation and storage of data, associated with the collection of samples in biomedical studies.
Generic packet visualization tool for generating flow diagrams from formatted logs. Can be used for cache coherency diagrams, software interaction diagrams or to plot network communications.
Weatherlib is a Java library providing weather support for your application. It is able to retrieve weather informations from the net and to rearrange them in a object data structure. All of gathered data is reachable through a Java bean-like interface.
...Use as a standalone web site or CD-ROM app, or as a sophisticated client-server system using an XML or SQL metadata directory to source distributed, incrementally-loaded spatial data.
Visually build and simulate boolean logic circuits
Visually build boolean logic circuits and then simulate their operation. Create custom components from user-designed circuits. Written in Java for cross-platform functionality.
NOTE: This project has moved to Bitbucket at http://bitbucket.org/kwellwood/circuitsandbox
PANDA (Protein And Nucleotide Data Archive) unifies the archival of the sequences from Taxonomy,GenBank,RefSeq,UniProt,PDB,and PRF on a regular interval to build and maintain a Protein and Nucleotide data archive. This project is part of BRC project fund