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Jaude is "Java pour les Astronomes Utilisateurs de Detecteurs Electroniques". Jaude is Eclipse RCP and plugin based. So it will provide an Eclipse interface for JSky library (http://archive.eso.org/JSky/).
The BioArray Software Environment (BASE) v1.2 is a comprehensive free web-based database solution for the massive amounts of data generated by microarray analysis. PrognoChip-BASE extends BASE v1.2.16, providing more functionalities.
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Automatic Conversion Tool for Accessible Web (ACTAW) is a project that tries to improve the Web Accessibility in an automatic way. ACTAW applies the WAI guidelines 1.0 defined by the World Wide Web Consortium (W3C). Developed in Java.
Crow - Computational Representation Of Whatever. A platform for the integration and mining of complex and distributed data. Represents cross-linked semantic web documents as a network of software objects and offers easy ways to filter, and sort them.
Adamant is a java application for annotation of microarray array designs. The software enables MIAME-compliant annotation of sequences spotted onto arrays and can produce output files in MAGE-ML and other data formats used by public microarray data repos
TrypC was developed for digesting protein sequences into peptides using fully, semi, and nontryptic cleavage conditions. Associated libraries allow direct loading of data from FASTA files.
Complete technical analysis & trading system, full set of features: retrieve, analyze EOD stocks data; manage multiple portfolios; technical analysis & graphical rendering; neural networks for generation of trading signals; support trader community
NetAtlas is a Cytoscape plugin that uses tissue gene expression data to filter cellular signaling network. The plugin identifies of tissue-defined networks, tissue-specific network components, and components with correlated expression across tissues.
Free Open Source VoiceXML editor programmed in Java (Swing). The VoiceXML document is regularly parsed, a tree view is built and syntax errors are reported in a specific table.
Baldr, aka Balder, is a plagiarism prevention software. Inspired by late researches in computer sciences, it’s able to compare documents using only properties linked to data compression.
NOTE: The IntAct package is now hosted at google code: http://intact.googlecode.com IntAct is an open source package to store and manipulate molecular interaction data.
febrl-gen is a Java-based frontend to Febrl, an open-source data linkage system written in Python. Users can configure the parameters of a linkage project through the frontend, and febrl-gen will generate a Febrl-ready configuration file.
VxmlSurfer is a modular, multi-platform, extensible VoiceXML 2.0 interpreter, geared to Web browsing as opposed to telephony. VxmlSurfer is currently used as a user interface for the HearSay non-visual Web browser.
AbuGraph is a freely available Java application for the layout and visualization of directed graphs. Bound to a TCP port, it supports dynamic graph creation receiving commands from a telnet console or another third party application.
Wattos is a collection of mostly Java programs for Structural Biology and NMR Spectroscopy. It's programs analyze, annotate, parse, archive, and disseminate experimental NMR data deposited by authors world wide into the PDB and BMRB.
Combination of data visualization and data minig. Apllication use iteration through visualization, user interaction a data minig steps to separate data into clusters.
The aim of MIEX (Metadata and Information Extractor from small XML documents) is to create a wrapper for the Stanford Parser, to extract and store metadata (syntactic structures, relationships among words...) from simple XML documents.
An attempt to design minimum cost broadband networks with the use of a modified version of the Particle Swarm Optimization method. A GIS subsystem is used for the visualization of data and results.
Visualization of finite state machines as a network graph. Accepted input files at the moment are: net files exported from xfst (Xerox Finite-State Tool) and lexc files (Finite-State Lexicon Compiler).
Trauma registry suite; Data collection application and server scripts to build trauma data warehouse and perform web-based analysis reporting. Cross-platform compatible for Windows, Apple, Unix, or Linux.
The goal of this project is to provide WSDL/SOAP wrapping services for OGC WMS, WFS and WCS in order to orchestrate them with a SOAP orchestration engine. It contains Parsers,WSDL generators, and Apache Axis2 example services. Current version is 0.9e