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A Java-written MIPS simulator developed to stimulate people learning the Assembly language. It adds graphics, sounds and user interation to make writing assembly programs more interesting.
Wattos is a collection of mostly Javaprograms for Structural Biology and NMR Spectroscopy. It's programs analyze, annotate, parse, archive, and disseminate experimental NMR data deposited by authors world wide into the PDB and BMRB.
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The SrcML Framework allows converting Sourcecode to a XML representation on which tools can then be used to deduce statical data for analyzing and visualizing the initial source. It also provides easy ways to write programs which modify other programs.
This program tries to simulate a simple computer. Users can write assembly programs for this simulator, which can be loaded and interpreted as instructions. An OS is also included with it, providing process dispatching and file system functions.
Mens is a collection of simple, easy to use menstruation calendars for a number of platforms. So far, there is one for mobile devices like PDAs and cell phones that can run Javaprograms.
Burkhard Heim's Mass Formula - A collection of programs that calculate the mass of a variety of sub-atomic particles, based on work by the late Burkhard Heim.
http://www.heim-theory.com/
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The JChemPaint Applet and Swing Application are Javaprograms for drawing 2D chemical structures like those found in most chemistry textbooks. It is based on the Chemistry Development Kit (cdk.sf.net). Downloads, tracker, and source code repository can be found on https://jchempaint.github.io
A collection of small utility programs to process geographic information and GPS data. Each program is written in Java and simple enough to be easy to understand. E.g. GTOPO30 to JPG, GLCC20 to JPG, GPX reader.
ScientificIcons is a central repository of icons for scientific programs, including molecular biology, lab automation, sample tracking, chemistry, biology, physiology, etc. Looking for an icon for a flask, chemical, gene, plate, robot, atom?
Alan is a Java Implenmentation of a Turing Machine for educational purpose. Features include: - Easy to use GUI - Many example Programs - ReUsable Turing Machine Component
ReadSeq is a program and library for conversion of biosequence data from one format to another, useful in various bioinformatics programs and services. It is written in Java, though an earlier version in C remains available.
The class libraries here provide infrastructure for creating simulations of low energy nuclear physics experiments, as well as some useful working programs that do simple simulations and analysis of experiments performed with magnetic spectrographs.
Draws accurately scaled model airfoil rib or foam cutting templates on any
printer in Windows 3.1 or later, or via clipboard to some drawing and CAD programs.
A Java program to parse chemical names using IUPAC nomenclature. The output can be either a visualisation of the molecule, or in a form for other programs to use (e.g. CML).
Ganita, in sanskrit, means mathematics - and that is what this java package is about. I wrote the classes in this package to help me with the various mathematical programs that I write. This collection of mathematical classes would help you in creating ma
Stynalyser is a tool that analyses the style of a text. It extracts several variables measuring the text style and displays the results. Export to other analysis programs possible. Programmed in Perl and Java.
GAPI (pronunced gappy) is the Genetic Algorithms Programming Interface - a set of Java classes that allow users to easily integrate Genetic Algorithms into their Javaprograms. See "GAPI specs" in the Feature Requests forum for more info.
MatrixOps is a console program written in Java that makes matrix operations. The goal of this project is to work as a Java tutorial, using some functions/programs typically made at school, with full documentation of the API.
This project comprises a collection of libraries and applications for the field of program analysis. The starting point is a type analysis for Javaprograms using Agesen's Cartesian Product Algorithm.