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Project35 is a suite of software tools that generate forms based on XML schemas. Originally derived from the Pedro research project, the Project35 tools have been modified to support more production-level use cases, esp. in the developing world.
LAMINA (Leaf shApe deterMINAtion) is a tool to provide classical measures of leaf shape (blade dimensions) and size (area) as well as measures that indicate asymmetry in leaf shape and measures of herbivory damage (missing leaf area).
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The aim of the project is to provide open source collection of algorithms in the field of spectroscopy: data handling and processing, modeling and artificial intelligence tools.
WOOKI is a peer-to-peer wiki. It based on unstructured p2P network with data replication. WOOT framework synchronizes data. SWOOKI is a semantic extenion of WOOKI. It is implemented as a plugin of WOOKI. SWOOKI is peer-to-peer semantic wiki.
An extended version of RoboCup Rescue Simulation official viewer intended to make it more informative. It utilizes charts, statistics and some missing little useful features.
GraXML is a Geometric Modeller for handling High Energy Physics experiments' Detector Description and Event data. It containes full 3D visualisation of the managed elements. It uses Java3D to create, render and manipulate SceneGraph.
The Swiss Protein Identification Toolbox (swissPIT) is a project at the Swiss Institute for Bioinformatics (SIB) in Geneva which aims at the development of an automated analysis system to identify proteins using MS and MS/MS based data.
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UDA stands for Universal Descriptive Algebra. It consists of a Java package handling universal algebras and relational structures as description systems.
GTdb - Modular genotype database for all markers. The
database has core which captures information common to different
variation measurements and extensions to method and instrument
specific data.
Praxiteles is a cross-platform interactive visualization tool for comparative genome map data. It is particularly well-suited to viewing multiple related genomes or chromosome segments that have highly diverged gene content and order.
An easy to extend, highly graphical, easy to use 2D robot simulator specialized for path planning algorithms. Can be used in testing various robotic algorithms, and already used for comparison of path planning algorithms like RRT, RRTConnect, PRM, RboT..
It provides a graphical animated representation of a network simulation run (e.g. for ns-2). Further, common metrics are calculated and displayed. The tool is written in Java and supplies 2 frontends (applet and stand-alone application).
NLO helps studying the nonlinear optical effects of crystals. It offers a GUI to plot the theoret. expected "maker fringes", captures images from video, retrieves data from and sends data to a LockIn, controls a stepping motor, imports and plots datase
ESSE is a flexible, efficient and easy to use search engine for data mining in environmental data archives. ESSE will help you find useful data even if you don't know exactly what you are looking for.
OptorSim is a Grid simulator designed to test dynamic replication strategies used in optimising data location within a Grid. Each simulated site contains several storage or computing elements. Simulated jobs run and file accesses may trigger replication.
The metabolomics standards initiative (msi) will develop a Core Information for Metabolomics Reporting (CIMR) recommendation and a more formal and semantically defined corresponding ontology (msi-ontology).
GDS is a project to check generic measured earth sciencedata. It is also an interactive database management system to store all data in MySQL-DB. GDS rules as project based management system with unlimited stations. Each station manages 20 sensors.
The ExactFDR software package is an improvement of
permutation-based False Discovery Rate (FDR) estimation methods
that takes advantage from exact p-value computations for analyzing Genome-wide association studies data
FrAid(FRactal AID) is an interface to Java, allowing it to proc. math. data(functions/equations). A compl. standalone system utilizing the FrAid prog. lang. is available(no need to be Java programmer to use it!). Use instead of Matlab. High res. graphics
An open source program that has the ability to graph data collected from scientific experiments. It will fit a variety of linear and non-linear regressions to data and will have the ability to save and print graphs.
Tuatara Turing Machine Simulator is a graphical tool for designing and executing Turing Machines. Designed primarily for teaching purposes, it features a simple point-and-click interface.
BioStream enables bioinformatics researchers to create, query and apply tools to their own databases. It supports sequence files and other data types by allowing the creation of metadata definition files.
RDV is a visualization environment for scientific and engineering data. Built on top of the RBNB dynamic data server, it supports local and remote data sources and can visualize numeric, video, image, and audio data in a number of different ways.