Showing 2679 open source projects for "research"

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  • 1
    OARS Android IMU & GPS Data Logger

    OARS Android IMU & GPS Data Logger

    OARS - Orientational Awareness Reaction Systems

    The OARS app is a data logger developed to run on Android OS and devices containing an internal GPS ,along with micro-electro-mechanical systems (MEMS) chipset. Specifically the Invensence MPU-6000 or newer. This chip is a highly accurate inertial measurement unit, or (IMU). Contained within this small IMU is a 3-axis Accelerometer, 3-axis Gyro, and 3-axis Magnetometer. Along with a built in processor, it can calculate movements along 9-axis. Depending on platform and app setting, OARS can...
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  • 2

    SoNIA (Social Network Image Animator)

    Social Network Image Animator creates animations of network data

    SoNIA (Social Network Image Animator) is a Java-based package for visualizing dynamic or longitudinal network data and rendering it out as animations. The home page with examples is located at http://sonia.stanford.edu Documentation is at https://sourceforge.net/p/sonia/wiki/Main_Page/
    Downloads: 0 This Week
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  • 3

    Chordalysis

    Log-linear analysis (data modelling) for high-dimensional data

    ...Chordalysis makes it possible to discover the structure of datasets with thousands of variables on a standard desktop computer. Associated papers at ICDM 2013, ICDM 2014 and SDM 2015 can be found at http://www.francois-petitjean.com/Research/ YourKit is supporting Chordalysis open source project with its full-featured Java Profiler. YourKit is the creator of innovative and intelligent tools for profiling Java and .NET applications. http://www.yourkit.com
    Downloads: 0 This Week
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  • 4
    Parallel Compute
    Center for Parallel Computing
    Downloads: 0 This Week
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  • 5
    Observation Manager
    Java based astronomical logging software which stores it's data in a free and open XML based format (OpenAstronomyLog). Discontinued project: Please check out the fork: https://github.com/capape/observation-manager for an updated version
    Downloads: 0 This Week
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  • 6
    MolTPC

    MolTPC

    MolTPC provides a solution for fully automatic tautomer enumeration.

    Besides all their conformational degrees of freedom, drug-like molecules and natural products often also undergo tautomeric interconversions. Compared to the huge efforts made in experimental investigation of tautomerism, open and free algorithmic solutions for prototropic tautomer generation are surprisingly rare. The few freely available software packages limit their output to a subset of the possible configurational space by sometimes unwanted prior assumptions and complete neglection of...
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  • 7

    cnvCapSeq

    detecting & genotyping CNV in long-range targeted resequencing.

    cvnCapSeq is a set of Java-based command-line tools for detecting and genotyping copy number variation (CNV) in targeted resequencing experiments of large contiguous genomic regions.
    Downloads: 3 This Week
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  • 8

    BioExtrac

    Support scientific/logistic process to extract samples from a biobank

    This application supports the two process scientific and logistic . - register the demand for an analysis - register the targets, load in the database - obtain the best list of samples for those targets (the search can be made with different parameters) - be able to do it again till the list is not satisfied the statistician ( in term of analysis power ... ) - made the list in an excel spreadsheet - upload the list of the picked samples and upload the database - made the list...
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  • 9
    JFCM
    Java implementation of Fuzzy Cognitive Maps (FCM). Implementation aims to be: small (and fast), simple to use, flexible enough to be used as a basis for other projects / libraries.
    Downloads: 0 This Week
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  • 10

    DDrive

    Simulador de discos HDDs e SSDs

    Este software é um simulador de discos parametrizáveis em cenários configuráveis com a capacidade de receber extensões de modos de geração de rajadas, escalonadores e analisadores.
    Downloads: 0 This Week
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  • 11

    libVMR

    VMR - machine learning library

    libVMR is a class library written in Java which implements code generator for group method of data handling - GMDH. The library is intended for users, with machine learning skills. libVMR provides an effective framework for the research and development of data mining and predictive analytics. libVMR is based on the most popular neural network model with a higher generalization ability from kernel tricks - vector machine by Reshetov (VMR). The library has been designed to learn from data sets. Typical applications here are pattern recognition ( binary classification).
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  • 12
    XBM

    XBM

    eXtensible Behavioral Modeling (XBM) framework

    Impact Computing's eXtensible Behavioral Modeling (XBM) framework is an open, flexible and customizable platform providing integrated access to an extensible hybrid combination of modeling, simulation and visualization tools.
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  • 13
    Libraries, documentation, examples & drivers for Eagle Technology South Africa's Data Acquisition products. These include ISA, PCI, PCI Express, USB, Serial & Ethernet. Supported languages will be C/C++, JAVA, Perl, Python.
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  • 14

    TUIT

    Taxonomic Unit Identification Tool

    For the installation instructions please see Wiki page: https://sourceforge.net/p/tuit/wiki/ IMPORTANT: since version 1.0.4.0 TUIT allows to select RDP-like formatted output to improve out of the box compatability with tools, that assume RDP-formatted input. A new field has been added to the properties.xml, please make sure to update it to contain <OutputFormat format="tuit"/> or <OutputFormat format="rdp"/> in the <BLASTNParameters> section. Read our paper in Biotechniques:...
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  • 15
    Cardiac Atlas Project
    The aim of the cardiac atlas project is to establish a structural and functional atlas of the heart. This project is funded by the NIH grant and led by the University of Auckland, New Zealand.
    Downloads: 0 This Week
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  • 16
    ALTER is a web-based tool to transform between multiple sequence alignment formats. ALTER focuses on the specifications of mainstream alignment and analysis programs rather than on the conversion among more or less specific formats.
    Downloads: 4 This Week
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  • 17

    cnvOffSeq

    detecting & genotyping intergenic CNVs using off-target exome data

    cnvOffSeq is a set of Java-based command-line tools for detecting and genotyping intergenic copy number variation (CNV) using off-target data from whole-exome sequencing experiments.
    Downloads: 0 This Week
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  • 18
    Java class libraries for structural biology development: includes protein format conversion tool, printf-based text formatting, Pred2ary secondary structure prediction, neural net library, Hooke-Jeeves global optimizer, and misc. math & statistics.
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  • 19

    Belief Merger

    A simple Belief Merging Prototype

    Belief merging aims at combining several pieces of (possibly inconsistent) information coming from different sources. The goal is to produce a single consistent set of information, trying to keep the most of the information of the sources. A belief merging operator is the responsible for making the belief merging. With this tool you can compare the ΔΣ, ΔGMax and the Δps (PS-Merge) operators.
    Downloads: 0 This Week
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  • 20
    Avalon Cheminformatics Toolkit

    Avalon Cheminformatics Toolkit

    Avalon Toolkit for SMILES-based cheminformatics services

    The Avalon Cheminformatics Toolkit contains tools to render and canonicalize SMILES and manipulate MOL file and related formats as well as structure fingerprinting.
    Downloads: 14 This Week
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  • 21
    OpenFlux2 is an extended version of OpenFLUX (https://sourceforge.net/projects/openflux/) - the modern MATLAB-based modelling software for 13C flux analysis (MFA). The following features were implemented in OpenFLUX2, which were not present in original software: integrated support for calculation and analysis of parallel labeling experiments (PLE), extended statistical analysis of parameter estimation results, calculation of fluxes and measurements correlation, structural identifiability...
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  • 22

    Tablet Segmentation Tool

    Segmentation tool for Tablets

    This tool provides the means for manual segmentation of gray scale images.
    Downloads: 0 This Week
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  • 23
    Full featured free PACS based on dcm4chee and mysql, with remote web accession available for Linux in Debian packaging format for x86 32 and 64 bit processors. (KEYWORDS: PACS,DICOM,HL7,WORK LIST)
    Downloads: 4 This Week
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  • 24
    Java Oriented Matroids
    This is a Java library for manipulating Oriented Matroids.
    Downloads: 0 This Week
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  • 25
    NeISS
    NeISS (National e-Infrastructure for Social Simulation) is a JISC funded project which will produce a platform for social simulation. Project Web site: http://www.neiss.org.uk
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