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Modelio-Open is a project hosting a set of open source extensions (SoaML, SysML and UML Testing Profile) for a previous version (1.2) of the Modelio Free tool .
Currently, the lastest version (2.x) of Modelio modeling and generation tool is available at http://modelio.org/downloads/download-modelio.html. All extensions are downloadable at http://forge.modelio.org/projects.
iso2l (ˈaisəutuːl, spoken isotool) is a software to calculate the isotopic distribution of a chemical formula or a amino acid chain.
The development has been MOVED TO https://github.com/binfalse/iso2l
VisualSNI/VisualSEF is a graphical editor for modeling the SNI diagrams of the MACAO methodology. SNI models users interfaces independently of any HCI technology. VisualSEF fits SNI to a specific model (SEF, SEP, SEA). See http://www.jbcc.fr for more
Software for optimization of multi modal, multi dimensional functions based on SOMA algorithm. Program is implemented on top of hadoop, and is especially well suited for functions with high computational times because of its distributed nature.
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The goal of the See&Touch project is to design/implement a special mouse for disabled people, which allows a person to fully control a computer by using just vision and one single body movement. This project develops hardware, firmware and software.
An android app to display nutrient contents of basic food items, and to calculate nutrient contents of complex meals and menus of arbitrary periods compared to the Dietary Reference Intakes to analyze and refine diets. (Nutrika for Android)
Jep is a Java package for parsing and evaluating mathematical expressions. It currently supports user defined variables, constants, and functions. The open-source Jep project was halted in favor of commercial development of version 3.0 upwards.
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Populating Research Data Australia (RDA) with collection descriptions of Australian-related biomolecular data held in the European Bioinformatics Institute (EBI) databanks. This project is ANDS-funded through the DIISR Education Infrastructure Fund.
A program for converting between physical units, such as feet and meters. There is a Java library, for use in Java applications, and a PalmOS application. It is able to mix units and convert between systems, such as the Metric and the English systems
Pamvotis is a Wireless LAN Simulator for all the current physical layer extentions of the IEEE 802.11 (IEEE 802.11 a/b/g) standard and for the IEEE 802.11e Draft for Quality of Service in WLANs.
JTransforms is the first, open source, multithreaded FFT library written in pure Java. Benchmark results show better performance than FFTW. The latest version is available at http://github.com/wendykierp/JTransforms.
The Celera Genome Browser, developed at Celera Genomics as part of Celera's sequencing and annotation of the human genome, and released as open source in 2006.
PileLine (Pileup pipeLine) is a toolkit for efficient handling of genomic position (GP) files, produced by next-generation sequencing experiments. It is designed to be memory efficient by performing on-disk operations over sorted GP files.
A program for cropping GPX track files. The GUI plots the GPX track (latitude vs longitude) and lets the user remove GPS points from the beginning and end of the track respectively. There is also a built-in Command Line Interface.
Note: No development anymore since I found out that GpsPrune does all the things I was looking for.
An educational tool for designing and simulating digital logic circuits, featuring a simple-to-learn interface, hierarchical circuits, wire bundles, and a large component library. As a Java application, it can run on many platforms.
This Project is to make a robotic platform and Soft Brain for a self learning research robot.
For making it modular we are using OSGI with rosjava javacv.
Android Auto Tester utilizes Android's monkey runner and hierarchy viewer to automatically traverses the hierarchy of an Android application's GUI and simulates user inputs from the host side, without accessing the application's source code.
OpenForecast is a package of general purpose, forecasting models written in Java that can be applied to any data series. No knowledge of forecasting is required. Using this package, the most appropriate algorithm for your data will be selected.
3D Genome Tuner draws circular genome map and enables viewing multi-genomes in 3D context. It also provides genome analysis and sequence alignment, making it a powerful tool in genome studies and demonstrations.
VRforCAD developed in Java and Java3D API, combines two systems: Computer-aided design (CAD) system and Virtual Reality system with its special equipments for visualization and manipulation. See more at: http://www.vrforcad.org