Search Results for "gnu science" - Page 20
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Showing 1765 open source projects for "gnu science"
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Geographic Information System Development Platform build on Netbeans RCP using GeotoolKit.org library.
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BinBase
BinBase is a software for the automatic analysis of Massspec data from
BinBase is a software for the automatic analysis of Massspec data from LECO GC-Tofs. All code and documentation has been moved to the google code site of this project: https://code.google.com/p/binbase/ And support is provided by the company coding and more, which can be reached under: contact@codingandmore.org -
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cnvHiTSeq
cnvHiTSeq is a set of tools for detecting CNVs using sequencing data.
cnvHiTSeq is a set of Java-based command-line tools for detecting Copy Number Variants (CNVs) using next-generation sequencing data. cnvHiTSeq uses standard BAM files as input. -
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Multilingual Content Synchronization with Wikis: CoSyne is a Research and Technological Development project co-funded by the European Union. Details: http://cosyne.eu
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Math Simulator
A simulation software for numerical techniques.
Math Simulator is a java-based application which simulates various mathematical techniques.It is extremely useful for the Engineering students and for professionals. Most importantly, unlike most others Math Simulator is an Application rather than a java - library. So, user is not required to have any computer background. A Unique feature of Math Simulator is that it allows you to save queries for later reference. Hence you can save the problems along with their results. -
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OGEMA allows software applications aiming at energy management and energy efficiency to be executed on an embedded computer (the Gateway) connected to building automation systems. OGEMA wiki https://www.ogema-source.net/wiki/
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IRIS is an extensible reasoning engine for Datalog extended with function symbols, unsafe rules, negation, locally stratified or non-stratified programs, XML schema data types and a comprehensive and extensible set of built-in predicates.
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Java & MPEG-7 based tools for annotation and retrieval of digital photos and images (Caliph & Emir). LIRE has moved to https://github.com/dermotte/lire. Caliph & Emir have moved to https://github.com/dermotte/CaliphEmir.
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FroZenLight connects simple line art and mathematics. The source of light can be positioned so that either symmetric reflection patterns or secret messages (Cryptography) are created. Example light patterns and math exercises for education are provided.
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GEPETTO - Gene Prioritization in Java
GEPETTO (GEne Prioritization ExTended TOol)
GEPETTO (GEne PrioriTization ExTended TOol) is an original open-source framework, distributed under the LGPL license, for gene selection and prioritization on a desktop computer that ensures confidentiality of personal data. It takes advantage of the data integration capabilities in the SM2PH-Central Framework(KD4v,MSV3d,BIRD,..), combined with in-house developed gene prioritization methods. It currently incorporates six prioritization modules, based on gene sequence, protein-protein... -
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Ablator
A tool for automating laser ablations for neuroscience
Ablator is a suite of software that automates the microscopic detection of cell targets and also directs a 2-photon microscope to lesion these targets in arbitrary patterns for neuroscience research. See Hayes et al 2012 for an example of its usage (http://www.pnas.org/content/109/21/8286.abstract). -
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ME_DSS
Microemulsion Decision Support System
This application allow user to predict microemulsion region based on algorithm consisted of artificial neural networks and random forests. Those techniques combined create Decision Support System. Application was created as a part of project K/DSC/000033 subsidy for young researchers from Polish Ministry of Higher Education. -
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TreeGrOSS Forest Growth Simulation
Software for modelling tree growth
Tree Growth Open Source Software is a Java based version of the forest growth simulator for north west Germany BWINPro. -
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Autmated Peptide Screening
Screening peptides for MHC and/or MHC-T cell receptor affinity
Modified version of AutoGrow, autogrow.ucsd.edu/ , with a mutation script added in the class files, and a global change of the defined mutation point from Hydrogen atoms to Calphas, to allow placement of Amino Acids. Deposited are 3 versions, used for my PhD Thesis. These allow for mutation of short 2-15 amino acid peptides, and associated screening of these using AutoDock or AutoDock Vina, allowing for 8 CPU systems to screen 10K peptides a day or 1-2K with flexible residues added in. A... -
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Timina is a Java web-based application for automation of all steps of a genome sequencing project: submission, assembly and annotation of sequences.
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VSMOExp
Ontologies, which are made up by standardized and defined controlled
Ontologies, which are made up by standardized and defined controlled vocabulary terms and their inter-relationships, are comprehensive and readily searchable repositories for knowledge in a given domain -
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mesoFON
mesoFON is an individual-based mangrove forest model, a KiWi extension
mesoFON is an individual-based mangrove forest model. It is a Java implementation of the KiWi model done with RePast Simphony. It contains several new features: (1) You can add up to 10 species via the GUI. However, in principle, the number of species to be included programmatically is unlimited. (2) You can use a variety of growth functions via typing them in as a string on the GUI. (3) The model is transparent, sinc it comes with the Eclipse workbench of RePast. -
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The FAKE GAME tool uses natural evolution to evolve Data Mining models. It incorporates several preprocessing, optimization and visualization methods aimed to streamline the Knowledge Discovery process. Knowledge Extraction from data is being automated!
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MionChrom
Signal processing for chromatography
MionChrom interprets ASCII data from GC-C-IRMS systems, plots it, identifies peaks and autointegrates the results. The user can manually integrate peaks with different tools. The results is reported in *.XLS, *.TXT and *.PNG. ------------------------------------------------------ MionChrom is soon to be replaced by MionMass which isn't a open sourced project. -
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ABC-DynF
Adaptive Bayesian Classifier with Dynamic Features
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Open Rocket Toolkit
Simulation of historical and contemporary launch vehicles
ORT is a tool for modelling and flying launch vehicles of arbitrary size and complexity. Unlike OpenRocket, it does not focus on amateur rockets but on real-world launch vehicles. The bundle includes a graphical design tool with an integrated simulation engine for rocket launches. Also included in the bundle is a playback application and a headless driver for logging simulations into spreadsheets. ORT integrates JME3 for 3D rendering. -
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Simured is a multicomputer network simulation whith visual interface to see packet movement on the network. It is multi platform and there are versions in Java and C++.
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Transliterator between any Language files - Map Fonts, Create Encoding Scheme, Input Phonetic, Indian, Roman, Tamil, Hindi, English, French, German, Spanish or Any World Language Keyboard. Ex: [Phonetic Input]-[Any World Language Output] or ViceVersa.
