Showing 198 open source projects for "search"

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  • 1

    Ghawwas_V4

    An open source system for Arabic corpora processing

    ...Frequency list for single word and N-Grams b. Concordance c. Collocation (MI, CHI Squared, LL, T-Score, Z Score, Dice, Log Dice, Weirdness Coefficient) d. Lexical patterns search e. Two corpora frequency profile comparison based on MI, CHI, LL, T-Score, Z Score, Dice, Log Dice, Weirdness Coefficient f. Accept Windows and UTF-8 character encoding g. Accept TXT, DOC, DOCX, RTF and HTML formats h. Export the processing results in CSV file format
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  • 2
    SMSD

    SMSD

    SMSD is a Java based software library for calculating MCS.

    SMSD is a Java based software library for calculating Maximum Common Subgraph (MCS) between small molecules. This will help us to find similarity/distance between two molecules. MCS is also used for screening drug like compounds by hitting molecules, which share common subgraph (substructure).
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  • 3
    Universal Tag Finder

    Universal Tag Finder

    Is tool for query HTML content

    Universal Tag Finder is a tool to query against html content in the file system. For developers it allows to find out relevant elements during the troubleshooting and validating periods. Does not need to bother on massive regex to find out elements.
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  • 4
    ...In the current status we have implemented a well founded reinforcement learning core in Java with many popular usecases, environments, policies and learners. Obtaining the teachingbox: FOR USERS: If you want to download the latest releases, please visit: http://search.maven.org/#search|ga|1|teachingbox FOR DEVELOPERS: 1) If you use Apache Maven, just add the following dependency to your pom.xml: <dependency> <groupId>org.sf.teachingbox</groupId> <artifactId>teachingbox-core</artifactId> <version>1.2.3</version> </dependency> 2) If you want to check out the most recent source-code: git clone https://git.code.sf.net/p/teachingbox/core teachingbox-core Documentation: https://sourceforge.net/p/teachingbox/documentation/HEAD/tree/trunk/manual/
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  • 5

    popt4jlib

    Parallel Optimization Library for Java

    ...Implements a number of meta-heuristic algorithms for Non-Linear Programming, including Genetic Algorithms, Differential Evolution, Evolutionary Algorithms, Simulated Annealing, Particle Swarm Optimization, Firefly Algorithm, Monte-Carlo Search, Local Search algorithms, Gradient-Descent-based algorithms, as well as some well-known network flow and other graph algorithms. A fast parallel implementation of the network simplex method, and some full-fledged parallel/distributed MIP solvers will be added in the next version. In general, emphasis is given in improving the efficiency of the algorithms in shared-memory models via java threads, since multi-core machines are so wide-spread today.
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  • 6
    REHUNT

    REHUNT

    REHUNT (Restriction Enzymes HUNTing)

    REHUNT (Restriction Enzymes HUNTing) is a free and open source package implemented in JAVA for providing many useful methods for biological sequence analysis (especially in SNP genotyping) around restriction enzymes. All academic researchers are encouraged to use REHUNT in their studies or to integrate it into their systems and applications. Non-academic users or commercial needs are also welcome to use it. For further information or additional applications, please contact the author...
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  • 7
    jalicanto

    jalicanto

    Traveling Salesman Problem "window time based" aproximate solver

    Time based Traveling salesman problem solver. Using iterated local search algorithm, implements xkick perturbation Programmed in Java. A class to use the TSP Suite(Thomas Weise, Raymond Chiong, J ¨org L¨assig, Ke Tang, Shigeyoshi Tsutsui, Wenxiang Chen, Zbigniew Michalewicz, Xin Yao, Benchmarking Optimization Algorithms: An Open Source Framework for the Traveling Salesman Problem. 2014.),is implemented.
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  • 8
    MorseClusterSolver

    MorseClusterSolver

    The program is designed to search for clusters global minimum structur

    The program is designed to search for clusters global minimum structures of Morse clusters.
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  • 9
    Maps coloring

    Maps coloring

    Four color theorem application

    Search for a pencil and paper proof of the four color problem. See http://4coloring.wordpress.com for info. Please let me know what you think about this application. Also visit the youtube channel: http://www.youtube.com/user/mariostefanutti/videos
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  • 10
    Colloquium QDA

    Colloquium QDA

    A free and open source qualitative ethnographic interview coding tool.

    ...To run, make sure you first have JRE 8 or later installed (http://www.oracle.com/technetwork/java/javase/downloads/). Colloquium QDA is an open source cross-platform Java Swing app utilizing an embedded Java DB with Lucene integrated search.
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  • 11
    Androsm

    Androsm

    Map application using OpenStreetMap data

    Android application which shows a moving map which is created from OpenStreetMap data. It is a fork of GpsMid. Please note that Androsm is under a major rewrite. The binary release doesn't have a native Android UI yet.
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  • 12
    SMT: SAR Management Toolkit

    SMT: SAR Management Toolkit

    Application for managing land searches for missing persons.

    Experimental application for assisting in the management of land searches for missing persons. Incorporates OpenJump for GIS rendering of segments, establishing intitial POA values for segments through consensus or mixed consensus and statistical distances, POS and POA recalculation based on PODs from applied resources, and task assignments suggested by missing person behavior profiles.
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  • 13

    Ship Lock Scheduling

    Scheduling lockages at ship locks with several parallel lock chambers

    This Java software includes algorithms of combinatorical optimization for the NP-hard offline ship lock scheduling problem. Solutions and performed computations can be displayed graphically. Besides, there is a framework for generating test instances and running these in parallel, as well as R/JGR code for statistical evaluation. Some tools for estimating the quality of calculated solutions will be further improved. Initially the software was developed within a project of TU Berlin regarding...
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  • 14
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  • 15
    Twitter Research Data Collector
    It gives facility of collecting tweets through Twitter Streaming API w.r.t different search criteria and to save tweets in CSV and ARFF (WEKA) file formats.
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  • 16
    Phrasal

    Phrasal

    Statistical phrase-based machine translation system

    Stanford Phrasal is a state-of-the-art statistical phrase-based machine translation system, written in Java. At its core, it provides much the same functionality as the core of Moses. Distinctive features include: providing an easy to use API for implementing new decoding model features, the ability to translating using phrases that include gaps (Galley et al. 2010), and conditional extraction of phrase-tables and lexical reordering models. Developed by The Natural Language Processing Group...
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  • 17
    Lucon

    Lucon

    Lucene based concordancer

    Lucon is a user friendly graphical concordancer. It runs on UTF-8 text and xml files and it allows to search for a sole word, for terms, for words at a certain distance and it displays the contexts of the searched terms.
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  • 18

    Sample Tracking

    Rediscover the Simplicity http://www.atgclabs.com/

    Help us to improve Freezer Web Access. We want to hear your feedback! Request new Freezer Web Access feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/fw Freezer Web Access is a user friendly program designed to assist researchers with establishing an efficient system for storing frozen biological samples. FWA can track all of your research, development and process scale-up data in a single data storage platform, providing a...
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  • 19

    Lab Processes

    Rediscover the Simplicity http://www.atgclabs.com/

    Help us to improve Lab Processes. We want to hear your feedback! Request new Lab Processes feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/lp Lab Processes is a comprehensive and straightforward application specially designed for biologists and chemists who need to conduct a wide variety of tests and experiments on animals. Lab Processes requires minimal computing skills. Genetic and physiological data can be entered either...
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  • 20

    Lab Storage

    Rediscover the Simplicity http://www.atgclabs.com/

    Help us to improve Freezer Web Access. We want to hear your feedback! Request new Freezer Web Access feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/fw Freezer Web Access is a user friendly program designed to assist researchers with establishing an efficient system for storing frozen biological samples. FWA can track all of your research, development and process scale-up data in a single data storage platform, providing a...
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  • 21
    Mutation Mapper
    PLEASE NOTE: THIS PROJECT PAGE WILL NO LONGER BE UPDATED - PLEASE USE THE GITHUB PAGE (https://github.com/gantzgraf/MutationMapper) TO FIND THE LATEST RELEASE (https://github.com/gantzgraf/MutationMapper/releases/latest). Predict functional consequences of mutations identified from sanger sequencing.
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  • 22

    P-VCD

    Content-Based Video Copy Detection

    ...More details in http://www-nlpir.nist.gov/projects/tv2011/tv2011.html#ccd and in http://www-nlpir.nist.gov/projects/tvpubs/tv11.papers/prisma.pdf P-VCD has also been used at TRECVID tasks: Instance Search (INS) 2012-2013 and Multimedia Event Detection (MED) 2013. This project is currently supported by ORAND S.A.Chile (http://www.orand.cl/) and is partially funded by Conicyt PAI-781204026.
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  • 23
    SITools2
    SITools2 is a new CNES generic tool performed by a joint effort between CNES and scientific laboratories. The aim of SITools is to provide a self-manageable data access layer deployed on already existing scientific laboratory databases.
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  • 24

    BioExtrac

    Support scientific/logistic process to extract samples from a biobank

    This application supports the two process scientific and logistic . - register the demand for an analysis - register the targets, load in the database - obtain the best list of samples for those targets (the search can be made with different parameters) - be able to do it again till the list is not satisfied the statistician ( in term of analysis power ... ) - made the list in an excel spreadsheet - upload the list of the picked samples and upload the database - made the list for the laboratory which will made the technical parts
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  • 25

    TUIT

    Taxonomic Unit Identification Tool

    ...Read our paper in Biotechniques: http://www.ncbi.nlm.nih.gov/pubmed/24502797 Taxonomic Unit Identification Tool (TUIT) is a free open source platform-independent software, designed specifically to facilitate taxonomic annotation of nucleotide sequences via BLAST homology search against the NCBI databases. TUIT is immediately applicable for both to 16S microboime studies as well as for taxonomic classification of the nucleotide reads. Please see the project's Wiki page.
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