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Lucene Oracle Integration using Data Cartridge API
Lucene Domain Index is full integration of Lucene project running inside the Oracle database using Oracle JVM. The integration provides a transparent detection of row data changes and an SQL layer for doing search.
The LabLog is a free tool to document projects running in a lab and to manage experimentally obtained data and its metadata. LabLog interfaces to a mySQL database that stores this information. Allows easy searching and retrieval of once recorded data.
...Supports search, autocompletion, launching scripts, interactive console, debug and integrated plotting on Octave versions 3.2.x, 3.4.x and 3.6.x.
The current goal is to make it running out-of-box on multiple platforms. Currently only Linux and Windows are supported.
Mac support is possible. The project needs a maintainer for Mac version, since I don't have Mac to build Octclipse and test it on this platform.
Also, it is worth to support Eclipse 4.0 Juno with DLTK 4.
...A web application Visual SPiM, and a destkop application SPiM Player. Both simulation tools require to be run on a Windows platform.
Fortunately Microsoft has also released a command line version for Linux and Mac OS based on OCAML however this version will only output a CSV file for the simulation results.
SPiM2Eclipse provides a bridge for those running SPiM from the command-line by allowing simulations to be completed by a single click, displaying an embedded plot of the results.
Features:
-As an Eclipse plugin you have all of the powerful features of Eclipse available to you.
...
GriF is a new JAVA Collaborative Grid Framework developed by COMPCHEM Virtual Organization operating in the EGI Production Grid environment aimed at running multi-purpose scientific applications empowering Grid massive calculations.
A web-based interface for the Hadoop MapReduce framework that simplifies the process of writing and running MapReduce jobs. Aimed at introducing parallelism concepts in introductory computer science courses.
JECL, pronounced "Jekyll", is an open-source Java library implementing
a variety of evolutionary algorithms. The goal is to provide a uniform interface for describing problems, running evolutionary algorithms, and accumulating results.
The Java Evolutionary Computation Library is no longer under active development. We suggest the MOEA Framework (http://www.moeaframework.org/), jMetal (http://jmetal.sourceforge.net/), ECJ (http://cs.gmu.edu/~eclab/projects/ecj/) or JGAP...
Artificial intelligence evolves musical instruments played with mouse
Artificial Intelligence (AI) evolves musical instruments you play with the mouse from small blocks of Java code that operate on numbers, each block designed to keep all numbers in range -1 to 1 if they started in that range, and combinations of these evolved codes running 44100 times per second for high quality 44.1 khz audio. You can also write the Java code into its window. Uses Javassist internal compiler on the new Java code assembled by renaming variables to overlap eachother and...
The Aglets Software Development Kit (ASDK) is a framework and environment for developing and running mobile agents. Mobile Agents are a type of software agents that have the unique ability to transport themselves from one system to another. Doing so, an
SemaRule Navigator is an Integrated Suite of Open-Source and Free-License Software, placing Semantic and Text Analysis Technologies in the toolbox of Researchers, Students, and Enterprises.
A framework for the visualization of multi-layer networks
MuLaViTo is a multi-layer visualization framework which allows to visualize relations between multiple graphs in derived applications. Moreover, it provides helpful means like k-shortest path algorithms, running algorithms in a separate thread, ...
WSNWARE is an open source Java/OSGi middleware, designed for monitoring, controlling and standardizing Wireless Sensor Network. WSNWARE is a normalized message oriented middleware running on (and developed for) any OSGi containers.
A Matlab toolbox for interfacing with the pure JAVA numerical library Snifflib. This toolbox provides convenience m-files for interoperability with Snifflib from within an active Matlab session running a JAVA virtual machine.
Skatta - A Multiplatform System for the Design and Running of Audio and Visual Perception Tests. Skatta allows many different kinds of tests concerning the perception of audio and visual stimuli to be designed and run.
SLEDRIDE: Simplified Learning about Expression Data Running in a Desktop Environment. To provide a general workbench for pipe-lining microarray gene expression data from supervised learning results into unsupervised learning methods.
A small java API library for running the MM3 molecular mechanics package from within a java environment. It does not include MM3, nor implement MM3. The MM3 binaries have to be available on the user system.
PROSE is a system that performs controlled, systematic, and efficient modification of the code of running Java applications without requiring them to be shut down. PROSE is an infrastructure that supports software adaptation by extending apps at runtime.
Virtual RTAI Lab is a project aimed to develop an educational platform for Control System Design. It is composed by a server running on linux rtai and a java client, which allow the user to better understand parameters changing in real-time control.
GrALoG is a tool for editing and visualising graph-like-structures and the results of algorithms running on them. Through it's plugins GrALoG is hugely extendable, i.e. plugin-developers can define their own graph-like structures and algorithms.
DrPangloss is a python implementation of a three operator genetic algorithm, complete with a java swing GUI for running the GA and visualising performance, generation by generation
SurveyForge is a survey definition and execution tool oriented to statisticians running on JEE platform with special emphasis on data entry made easy, use of existing standards (Triple-S, Metanet, DDI) and reuse of standard (or not) classifications
Prenzl!! is a desktop application and a screen saver running artistic cellular automata. The application is based on an Eclipse architecture and the rules can be in native. Our mission is to provide a viewer and an SDK for this kind of art, called CArt.
Speedway Control - Hardware supported time measurement, switching and management for Slotracing systems of any scale.
Means indicating, evaluating and storing lap and/or sector times in selected or summarized running procedures.
Molevolve is a Java library for running a Genetic Algorithm to model the 3-dimensional structures of peptide chains from amino-acid sequences. Client code can specify its own peptide chain model, fitness functions and GA operations. Requires JDK 1.5.