A Free and Open Source Java Framework for Multiobjective Optimization
Analyze time-course data with significance tests, clustering, modeling
JBernstein: Exploration techniques for non-linear constraint checking
Measurement science-based performance & conformance testing framework
simple event-based plugin interface to open up hardwired software
Java API and tools for performing NLP and other AI tasks
Lapack/quadprog QP for VBA/.Net/Java
As of 2012-12-18, this project may now be found at Google Code.
Codon Usage Optimizer