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Append hundreds of different XML files into one large data document, validate, and attach a stylesheet. Stitcher is a porwerful summary reporting tool. Allows for complex file storage locations of xml data. UBL, HR-ML, LandXML ... visit stitcher.org.
NAMD Log Parser sorts through the log file generated by NAMD and extracts energy information to export to a graphing program or used in the basic graph provided.
The class libraries here provide infrastructure for creating simulations of low energy nuclear physics experiments, as well as some useful working programs that do simple simulations and analysis of experiments performed with magnetic spectrographs.
NeoBio is a Java class library of Computational Biology Algorithms. The current version consists mainly of pairwise sequence alignment algorithms such as the classical dynamic programming methods of Needleman-Wunsch and Smith-Waterman.
GNU PIC LIBRARY PROJECT
The interest of this project is to develop a set of Libraries that are released in LGPL License to use to PIC microcontroler programming.
Then any program resulted by this use would be a proprietary or free softwares.
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Extensible agent framework with the ability to perform common tasks such as notify you when you have a mail, or a message in your phone, or some web or file has change... A kind of automated webapp secretary.
Pattern recognition software package. It includes several classification and clustering algorithms. It can read data from a
set of images, an ASCII file or a JDBC connection. A small TCP data server with its corresponding JDBC driver is included.
JReferences is a tool to store and retrieve bibliographic references from a file or MySQL database.
It reads BibTeXML, DocBook XML and RIS type references, and can output these and BibTex.
A bibtex like alternative is also provided for DocBook XML docu
Dominatrix is a general purpose framework for building dynamic distributed projects. It is fairly stable, easy to use and extend, simple to install, and can be used for most any project that requires computation across multiple machines.
vIDE is a cross-platform tool for writing and simulating Verilog models. It provides user friendly project management and file editing, integrated simulation engine, waveform viewer, pre-compiled modules, and many other cool features.
This project provides software resources for creating solid models of proteins that can be printed on color 3D printers. The main focus is a java program that reads in a PDB file and produces a PLY format stick representation of the protein.
CoffeeTables is a high-performance, large-scale scientific data storage and retrieval Java library. CoffeeTables supports multiple storage backends, including CSV and HDF5.
The calendar algebra is a formal representation that captures the semantics of relationships between granularities of time. The software in this project serves as a basis for storing and converting time granularities defined by the calendar algebra.
LogicS is an EDA (Electronic Design Automation) desktop program, targeting digital circuits: designing, edtiting & simulating them. The user will be provided with a user-friendly environment for doing this (adding logic gates, creating links, simulating)
NecJGui is an antennas design tool, interface for Numerical Electromagnetic Code. It allows easily making NEC input files, and viewing them in 3D. It also contains a version of the simulator, so it's complete IDE for full-wave EM simulation.
ScenConnect shows scenarios as networks of situation and event tag sets, for fast comparisons. It links scenarios to tags, scores, and other metadata, creating situationals suitable for search, mining, machine learning, and planning.