Search Results for "research database" - Page 18

Java-based bibliography management software with Swing frontend and XML backend.

To provide a bunch of useful applications for daily use. The first of those applications was donated by NIH\'s DECA, it\'s called REX and is a Request/Bug tracker. All applications will be Struts 1.1 and greater based.

This tool integrates and enhances publicly available genome data from different sources into a local database. Using a web browser, scientists may view and query the data, keep persistent notes, and schedule batch services (such as BLAST) from NIH.

Talisman is an interpreter for a logical markup language. This language contains the content and logic of a web (or, in the future, Java Swing) based user interface, including arbitrary datatypes and processing actions.

OmniGene is a set of reausable components that have been packaged into frameworks. These frameworks are used to produce domain specific services for common bioinformatics tasks including: visualization, database access, and pipeline building.

A HTTP-proxy, written in JAVA for the purpose of tracking users. It's main (and at the moment only) use, is to gather data for usability testing.

Pattern recognition software package. It includes several classification and clustering algorithms. It can read data from a set of images, an ASCII file or a JDBC connection. A small TCP data server with its corresponding JDBC driver is included.

JReferences is a tool to store and retrieve bibliographic references from a file or MySQL database. It reads BibTeXML, DocBook XML and RIS type references, and can output these and BibTex. A bibtex like alternative is also provided for DocBook XML docu

MAGMA: Multiobjective Analyzer for Genetic Marker Acquisition A genetic algorithm for generating SNP tiling paths from a large SNP database based on the competing objectives of cost (number of SNPs) and coverage (haplotype blocks): Hubley R., Zitzler

It is a servlet/JSP based web application to manage your research references and notes. There is also a public server for those who do not have their own servlet engines. The public server can be customized so that it act like your private one.

A biological data warehouse that locally stores and integrates biological sequences, molecular interactions, homology information, functional annotations of genes, and biological ontologies. Website: http://bioinformatics.ubc.ca/atlas

ArrayCGH DataBase is an effort to distribute Array CGH data between clinical and research groups. It will be platform independent, and will utilize MySQL as it's persistent storage mechanism. A web client may be implemented at some point.

An online database and cross-platform, game-like client where gardeners/farmers (small or large scale) can log their actions and measurements (such as weather, yield, current plant size). Any user can then play it back visually, or play with the data and see a simulation inferred from the knowledge database, or calculate an optimal design within given constraints, inferred from the knowledge available at that time. This is both a tool for playing, in order to entertain and inspire...

A framework for image analysis and data analysis, aimed towards microscopy and the needs of current research.

UGLi ML: The Undirected Graphical Library for Machine Learning. Easy, agile learning and inference from structured/relational data using Markov Networks and Conditional Random Fields.

Crude Metabolic Pathway Analysis visualization software. For a software engineering class.

Trading Agent Competition (TAC) is an international forum designed to promote and encourage high quality research into the trading agent problem. The TAC SCM open-source software consists of a Java-based Game Server and and library for developing agents.

An approach about automatically turning folksonomies into leightweight ontologies.

jCase is a simulation toolkit for the evaluation of combinatorial auctions. Such auctions are used to allocate resources that are complementarities or substitutes.

This toolkit facilitates easier connections between stored data, intermediate data, and data presented to users in Java applications. The classes are abstracted as much as possible to allow wide use for various types of programs.

EXPE is an extensible environment for designing and running psychology experiments.

alinks is a set of POJO describing pedigree graphs.

This system provides support for the full lifecycle of technical or scientific publications' peer reviewing process including submission, reviewing, grading, conflict resolution, selection and authors’ feedback.

easy-to-use statistical package