Showing 822 open source projects for "tpm/j api java"

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  • 1
    Screensaver is a Lab Information Management System (LIMS) for high-throughput screening of small molecule and RNAi biological assays. It is a Java/JSF/Hibernate/Spring web application that is actively being developed and used at Harvard Medical School. Note: The Screensaver project has moved to GitHub at https://github.com/hmsiccbl/screensaver.
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  • 2
    ProteinTracker

    ProteinTracker

    Protein Reagent Tracking and Request

    A web based application to track protein related reagents including DNA constructs, cell lines, supes, and purified proteins. Supports creating, tracking, and prioritizing requests for transfections and DNA. Includes search and PDF reports.
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  • 3

    knowceans

    Utility classes from maps to search engine to random samplers

    Collection of several multi-purpose Java libraries. --- knowceans-tools = collection of Java utility classes. --- Highlights: --- org.knowceans.util: IndexQuickSort, TableList: apply order of one array/list to others +++ Vectors, ArrayUtils: array convenience +++ RandomSamplers, CokusRandom, ArmSampler, Densities: random sampling and distributions +++ Arguments: command line parser +++ StopWatch, Which, ExternalProcess: runtime stuff +++ ParallelFor: OpenMP workalike +++ PatternString, NamedGroupRegex: regex convenience --- org.knowceans.corpus: CorpusSearcher: full-text search engine +++ LabelNumCorpus: svmlight corpus storage and filtering +++ NIPS corpus with text, authors, labels and citations --- org.knowceans.map: InvertibleHashMultiMap, BijectiveHashMap: implement n:m and 1:1 relations. --- Other libs: knowceans-arms = port of the Adaptive Rejection Metropolis Sampler (ARMS) for arbitrary distributions +++ lda-j = port of lda-c, implementing Latent Dirichlet Allocation (LDA)
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  • 4
    MetaMaster is a Java-based desktop application for defining, managing and manipulating metadata associated with a collection of data files or datasets (both locally and on the network) which are bundled together into "data packages". ANDS-funded
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    Grafana: The open and composable observability platform

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  • 5
    This is a Java-based project for complex event extraction from text and co-reference resolution. Currently the code can read BioNLP shared task format (http://2011.bionlp-st.org/) and i2b2 Natural Language Processing for Clinical Data shared task format (https://www.i2b2.org/NLP/DataSets/Main.php). Event extraction includes finding events and the parameters for an event in a text. The method is based on SVM but other ML algorithms can be adopted. The method details are explained in the...
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  • 6
    OrthoInspector is a new software system for orthology/paralogy analysis. Its purpose is to facilitate the installation and the maintenance of a database describing orthology/inparalogy relations and to provide tools to exploit these data.
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  • 7
    Shape Grammar Interpreter
    SGI allows to define and interpret most of undeterministic 2D shape grammars. It supports real-time subshape detection and labeled rules. GUI is designed for easy manipulation with shape grammars: creation of shapes, rules and generation of designs.
    Downloads: 0 This Week
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  • 8
    wsnware
    WSNWARE is an open source Java/OSGi middleware, designed for monitoring, controlling and standardizing Wireless Sensor Network. WSNWARE is a normalized message oriented middleware running on (and developed for) any OSGi containers.
    Downloads: 7 This Week
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  • 9
    algevox
    Sistema de reconocimiento de voz usando CMU Sphinx-4 y un modelo acústico basado en el corpus de VoxForge en español y gramáticas en JFlex y BYACC/J para el dictado en habla casi natural para la escritura de expresiones matemáticas.
    Downloads: 0 This Week
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  • Inventors: Validate Your Idea, Protect It and Gain Market Advantages Icon
    Inventors: Validate Your Idea, Protect It and Gain Market Advantages

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  • 10
    SIMACT is a 3D smart home simulator for activity recognition developped at LIARA during the summer 2009. The goal of SIMACT is to enable scientist to simulate execution sequence of activity inside a smart home to conduct their research.
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  • 11
    MedioVis is concerned with the user-centred development of next generation visual information seeking systems for novice and nonexpert users. Various Browsing-oriented data exploration strategies are supported (overview & detail, filtering, zooming etc.)
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  • 12
    GeoMondrian
    GeoMondrian is a "spatially-enabled" version of Mondrian. GeoMondrian brings to the Mondrian OLAP server what PostGIS brings to the PostgreSQL DBMS, i.e. a consistent and powerful support for geospatial data. It also provides geo-extensions to MDX.
    Downloads: 0 This Week
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  • 13
    The Wikipedia Miner toolkit provides simplified access to Wikipedia. This open encyclopedia represents a vast, constantly evolving multilingual database of concepts and semantic relations; a promising resource for nlp and related research.
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  • 14
    ToxOtis
    ToxOtis is a Java interface to the predictive toxicology services of OpenTox. ToxOtis is being developed to help both those who need a painless way to consume OpenTox web services and for ambitious service providers...
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  • 15
    A system to perform analysis of large documents for the purpose of cataloging similar documents. Similarity is based upon contextual analysis of these documents done by identifying common words and proper nouns.
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  • 16
    API for robotech maid for my playground.
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  • 17
    BAMStats is a GUI desktop tool for calculating and displaying metrics to assess the success of Next Generation Sequencing mapping tools. BAMstats is written in Java and based around the Picard API.
    Downloads: 13 This Week
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  • 18
    jWords is a port of WORDS (by William Whitaker, a free latin-to-english dictionary program written in Ada), to Java. Besides the dictionary will be translated to the German language.
    Downloads: 0 This Week
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  • 19
    SIM-DL: Semantic Similarity Measurement Server for concepts (and individuals) represented using (expressive) Description Logics (DL).
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  • 20
    Populating Research Data Australia (RDA) with collection descriptions of Australian-related biomolecular data held in the European Bioinformatics Institute (EBI) databanks. This project is ANDS-funded through the DIISR Education Infrastructure Fund.
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  • 21
    XmlView
    GUI utility in pure Java for viewing and editing XML content; example of application built with Superficial http://superficial.sourceforge.net
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  • 22
    Healthcare Information System (EHR EMR PMS) for small hospitals and clinics. Scheduling, Orders, Meds, Pharmacy, Clinical Doc, HL7, Billing & more. Broad commercial support. Distributed clinical system written in pure Java with toolset to customize.
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  • 23

    ServiceRegistry

    A next-generation runtime service registry

    The promise of SOA leads us down the path of creating, publishing and both statically and dynamically consuming run-time service. These services can be either human consumable (web sites, widgets and/or portlets) or machine consumable (REST, SOAP, JMS, MQ, FTP, RMI, etc) services. The adoption and usage of UDDI has made clear that it is not the answer to the dynamic discovery and consumption model. This Service-Registry project targets the next generation of application and how they will...
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  • 24
    Lateralized Attention Assessment Computerized System. Java Open-source software for attention assessment, based on NAFW project (Neuropsychological Assessment Framework). © 2008 - UNIFESP / Igor Jirus Ramos Ribeiro / Prof. Dr. Carlos J. R. Campos.
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  • 25
    This is an independent fork of the ensj-core Ensembl Java API. This version of the API does not receive support from Ensembl. The project is still available under the original LGPL license.
    Downloads: 0 This Week
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