Search Results for "gnu linux" - Page 13
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Showing 2849 open source projects for "gnu linux"
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Java bio-informatics library to analyze and convert genomic sequence and assembly data. This library was created and used by the J. Craig Venter Institute (JCVI)
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DataCleaner
Data quality analysis, profiling, cleansing, duplicate detection +more
DataCleaner is a data quality analysis application and a solution platform for DQ solutions. It's core is a strong data profiling engine, which is extensible and thereby adds data cleansing, transformations, enrichment, deduplication, matching and merging. Website: http://datacleaner.github.io -
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MYRA
A collection of ACO algorithms for the data mining classification task
MYRA is a collection of Ant Colony Optimization (ACO) algorithms for the data mining classification task. It includes popular rule induction and decision tree induction algorithms. The algorithms are ready to be used from the command line or can be easily called from your own Java code. They are build using a modular architecture, so they can be easily extended to incorporate different procedures and/or use different parameter values. This project is now hosted at: https://github.com/febo/myra -
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jalicanto
Traveling Salesman Problem "window time based" aproximate solver
Time based Traveling salesman problem solver. Using iterated local search algorithm, implements xkick perturbation Programmed in Java. A class to use the TSP Suite(Thomas Weise, Raymond Chiong, J ¨org L¨assig, Ke Tang, Shigeyoshi Tsutsui, Wenxiang Chen, Zbigniew Michalewicz, Xin Yao, Benchmarking Optimization Algorithms: An Open Source Framework for the Traveling Salesman Problem. 2014.),is implemented. -
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spectralHMM
A spectral method for inferring selection from time series data
***WARNING*** This software was migrated to: https://github.com/popgenmethods/spectralHMM Support and updates will only be available at this new address. This software implements the algorithms described in the following paper: Steinrücken, M., Bhaskar, A. and Song, Y.S. A novel spectral method for inferring general diploid selection from time series genetic data. Annals of Applied Statistics, Vol. 8, No. 4 (2014) 2203-2222 -
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SWire
A Stata plugin for connecting Stata with other software
SWire is a software interface enabling us to query Stata for the executing of basic operations like reading or writing data. The core of SWire is a Java plugin which functions as a server and it can be queried by using the HTTP protocol. SWire is in essence a wrapper around the Stata-Java API and all the functions relating to this API can, therefore, be externally called by clients. SWire can be interrogated on a local network and it accepts AJAX queries, thus enabling the development of... -
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NOTE: Use of this codebase is NOT RECOMMENDED. This project has been migrated to github at http://jaerproject.net (or https://github.com/SensorsINI/jaer for the Java code). Commits have been disabled for the subversion sourceforge repository and new development is being done on the github repository. Java tools for Address-Event Representation (AER) neuromorphic processing. Uses USB hardware. See wiki at https://sourceforge.net/p/jaer/wiki/
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Maui
Maui is the Maltcms User Interface
Maui is the Maltcms User Interface, a rich client application for Chromatography-Mass Spectrometry and related research areas. -
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The project supports the Welsh Language Technology domain with a set of NLP tools that drive innovation and advance the development of sophisticated textual analysis solutions. The WNLT project delivers four core NLP modules; a) Word Segmentation for separating text into words b) Sentence Boundary Disambiguation for finding sentence boundaries c) Part of Speech Tagger for determining the part of speech of each word d) Morphological Analyser for identifying the root form (lemma) of words....
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RDRPOSTagger
A Rule-based Part-of-Speech and Morphological Tagging Toolkit
RDRPOSTagger is a robust, easy-to-use and language-independent rule-based toolkit for Part-of-Speech (POS) and morphological tagging. RDRPOSTagger obtains fast performance in both learning and tagging process. RDRPOSTagger also achieves a very competitive accuracy in comparison to the state-of-the-art results. RDRPOSTagger now supports pre-trained POS and morphological tagging models for Bulgarian, Czech, Dutch, English, French, German, Hindi, Italian, Portuguese, Spanish, Swedish, Thai... -
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bel_fft
FFT co-processor in Verilog based on the KISS FFT
...It comes with a Java wizard to configure the co-processor and to generate all required files (e.g. twiddle ROMs). It comes with integration into Xilinx Vivado, EDK, and Altera QSYS and includes example designs for Xilinx Zynq and with PCI-Express core (including Linux driver and application). bel_fft is distributed under the GNU Lesser Public License 2.1. -
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CalclipseMath
Java math expression parser and script interpreter
CalclipseMath – CalM for short – is a math parser written in Java. With a few lines of code CalM enables your application to evaluate user-supplied mathematical expressions, such as "e^(sin .25pi)" and "(sqrt e)^(sqrt 2)". The standard configuration of the parser has a wide variety of mathematical operations, ranging from basic arithmetic, trigonometry, combinatorics, linear algebra and more. CalM includes a script interpreter which is based on the math parser. The CalM scripting language... -
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VeriSiMPL
Verification via biSimulations of Max-Plus-Linear models
This toolbox is used to generate finite abstractions of autonomous Max-Plus-Linear (MPL) systems over R^n. Abstractions are characterized as finite-state Labeled Transition Systems (LTS). The LTS finite abstractions are shown to either simulate or to bisimulate the original MPL system. LTS models are to be verified against given specifications expressed as formulae in Linear Temporal Logic (LTL) and Computation Tree Logic (CTL). The toolbox intends to leverage the NuSMV model checker. Models... -
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Analog Insydes is a Mathematica toolbox for symbolic analysis of analog electronic circuits. This project provides a set of free add-ons to Analog Insydes, including a Java front-end and a native netlister for Cadence's Analog Design Environment (ADE).
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MELTING is a software to compute, for a nucleic acid duplex, the enthalpy and the entropy of the helix coil transition and then the melting temperature. Four types of hybridization are possible : DNA/DNA, RNA/RNA, RNA/DNA and mRNA/RNA.
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Java Information Retrieval System (JIRS) is an information retrieval system based on passages. This system has the advantage of being able to change to the different modules from the system and their functionality modifying the configuration XML file
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Simple-Scrape is a simple web-scraping library that allows for programmatic access to HTML code. No further techniques are needed and the library is very compact and thus easy to use.
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VBS for Research on the Internet
Welcome to the Volunteer-Based System for Research on the Internet!
Welcome to the Volunteer-Based System for Research on the Internet! This system is designed to provide detail data about applications used in the Internet. This information can be used for: - obtaining the knowledge which applications are most frequently used in the network - providing the users some basic statistics about their Internet connection usage (for example for which kinds of applications their connection is used the most) - creating scientific profiles of traffic generated... -
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PrimerSeq
Designs primers on flanking constitutive exons for RT-PCR
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BioFace is simple software for editing and analyzing DNA, RNA, and protein sequences that is written in Java using SWT and JFace as libraries. Opening GenBank, FASTA, EMBL, or simple sequence files and analizing these sequences can be done.
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Maroc
Software para la Medición Automática de la Oscuridad del Cielo
Aplicación para facilitar la toma de datos del nivel de oscuridad del cielo nocturno usando un SQM-LU y aplicando las directivas establecidas por la SEA en el proyecto NIXNOX. La aplicación se conecta via TCP/IP a una raspberry pi que controla tanto un brazo robot como el SQM-LU. Las instrucciones para configurar la raspberry pi estarán disponible en breve en: http://www.luz-cero.es/maroc -
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Maps coloring
Four color theorem application
Search for a pencil and paper proof of the four color problem. See http://4coloring.wordpress.com for info. Please let me know what you think about this application. Also visit the youtube channel: http://www.youtube.com/user/mariostefanutti/videos -
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WrapImaJ
Multi-platform API for Image Processing systems in Life Sciences
WrapImaJ purposes to be a multi-platform wrapper for different Image Processing systems for: - using the Java programming language. The purpose of WrapImaJ is not to combine an exhaustive collection of all functionalities of different imaging system, but to offer a simple, concise Application Programming Interface (API) - allowing to develop imaging software, the source code of which is independent from the underlying imaging system on which it relies. In it's current form, it... -
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CamBA is a Linux package for statistical analysis, by script/GUI, of neuroimaging data (fMRI/sMRI), developed at the Brain Mapping Unit, University of Cambridge. Non-parametric permutation-based statistics. Input images: 4D NiFTI files, output: HTML/
