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PANDA (Protein And Nucleotide Data Archive) unifies the archival of the sequences from Taxonomy,GenBank,RefSeq,UniProt,PDB,and PRF on a regular interval to build and maintain a Protein and Nucleotide data archive. This project is part of BRC project fund
The Genomic Diversity and Phenotype Data Model (GDPDM) captures molecular and phenotypic diversity data. MySQL databases are used to implement the schema. This project develops software tools (written in Java, Perl, etc.) associated with this model.
Visually build and simulate boolean logic circuits
Visually build boolean logic circuits and then simulate their operation. Create custom components from user-designed circuits. Written in Java for cross-platform functionality.
NOTE: This project has moved to Bitbucket at http://bitbucket.org/kwellwood/circuitsandbox
This project constitutes an implementation of a custom-design distributed computing environment. The implementation is based on a form of Nbody simulation, which ran successfully across 33 networked-hosts.
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Multired is middleware for automatic dynamic generation of multi-resolution representations for large spatio-temporal databases. It also provides an API which uses the middleware to support user-guided navigation of spatiotemporal data.
Open2Dprot is an open-source proteomics project for the development of bioinformatic tools for n-dimensional protein expression data analysis of quantified protein expression across multiple samples from research experiments.
iSNS is an interactive neural network simulator written in Java/Java3D. The program is intended to be used in lessons of Neural Networks. The program was developed by students as the software project at Charles University in Prague.
The virtual lab is a NASA-funded project to provide simulated instrumentation. ITG has developed a Virtual Microscope (Virtual SEM and LM) for viewing high-resolution, multi-dimensional image datasets. More info and data: http://virtual.itg.uiuc.edu
The Internet Soccer Database aims to build a database structure that can contain all fixtures/results/statistics/odds information for any soccer league/competition. Once the structure is defined the data will be populated and made available for analysis
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Project consist of 2 parts. One of them is a J2ME app. used to get information such as photo, position, speed & course from GPS and transfers it to the web server. Another one is a web app. which allows to manage and display received data using GoogleMap
Metaquokka is a highly configurable xml editor, currently available as Gridsphere portlet. Besides the default format, there is suppoert for ESysXML, a simulation description scheme for a geodynamics framework. Supports Generic Mapping Tools rudimentary.
The Canopy project is an initiative to merge and expand the functionality of Perl-speaks-NONMEM (PsN), Census, Xpose and PopED. The goal is to produce a coherent, inclusive and convenient platform for pharmacometric data analysis.
*** PROJECT NOT MAINTAINED ANYMORE *** The Grid [Seamless|Semantic] Data Access Middleware) is a Grid computing middleware for the semantic and transparent integration of multiple data sources which can be RDBMS, filesystems or other sources of data.
PING is a distributed, web-based, personally controlled electronic medical record system that is accessible to the nomadic user and built to public standards. The PING project includes a pluggable web services API and numerous client applications.
SurveyForge is a survey definition and execution tool oriented to statisticians running on JEE platform with special emphasis on data entry made easy, use of existing standards (Triple-S, Metanet, DDI) and reuse of standard (or not) classifications
VDC has been superseded by DVN: https://sourceforge.net/projects/dvn/ ---- The Virtual Data Center project is building an operational, open-source, digital library to enable the sharing of quantitative research data, and the development of distribute
This project intends to create an indexing search engine, for knowledge management. The primary object is to apply an information retrieval core. And implement a knowledge data discovery theory such as data mining algorithm, text mining.
A set of software components used to investigate and implement searching of music and audio. This covers content-based retrieval and meta-data based solutions, segmentation and content selection (summarisation) of audio and music (MIDI, MP3 and WAV).
Data Model that will be applied to backtesting. The main goal of this project is to create a data model that is able to process large amounts of data using a simple script.
This project aimed at creating framework and binary data format for etymological Arabic system. and will not continue hosted at sourceforge because the term of use determine me as enemy, so I am prohibited from using sourceforge services.
This software system serves as both a DICOM image viewer as well as a diagramming tool for collaborating notes on the given image sets. This my Computer Science graduate thesis project at Loyola Marymount University.
The goal of this project is to be an improvement of the original Network Animator (NAM) module provided as part of the Network Simulator 2 (NS2). This tool provides topology visualization, TCL script generation, and enhanced simulation animation.
The MatrixBrowser project presents a new approach for visualizing and exploring large networked information structures which may represent, for instance, linked information resources or metadata structures such as ontologies.
Project MOVED to Codehaus New location is http://esper.codehaus.org The Esper project aims to provide a general-purpose event processing facility in Java for complex event processing of real-time, high throughput data streams.
JXML2OWL Project is divided in two sub projects: JXML2OWL API, a library for mapping XML schemas to OWL Ontologies on the JAVA plaform. JXML2OWL Mapper, an easy to use standalone application with a graphical user interface using the JXML2OWL API.