Showing 375 open source projects for "assembly source code"

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    TraceTuner

    TraceTuner

    DNA sequencing quality values, base calling and trace processing

    Tracetuner is a tool for base and quality calling of trace files from DNA sequencing instruments. Originally developed by Paracel, a Celera Business, this code base was released as open source in 2006. TraceTuner was used by Celera to call 30+ million reads from both Drosophila and human genome sequencing projects. In 2000, Applied Biosystems bundled TraceTuner with ABI3700 Genome Analyzers and shipped it to the customers of these capillary electrophoresis sequencers. Later versions of TraceTuner, which support mixed base calling, have been used by the research community, the private biotech sector, and the U.S. government as components of different variant detection, genotyping and forensic software applications (e.g. ...
    Downloads: 3 This Week
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  • 2
    UfakPython is a small subset of Python programming language, for small embedded devices, like PICs. UfakPython sources are translated to C by UfakPython Compiler. Small Device C Compiler can then compile the C outputs to the target device's codes.
    Downloads: 0 This Week
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  • 3
    Testing tools source code of the Integrating the Healthcare Enterprise (IHE) PIX and PDQ v3 Integration Profiles
    Downloads: 1 This Week
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  • 4

    mobile-trail-explorer

    GPS tracker for J2ME phones

    This is a clone of the original Google Code repository. -I'm not the author! (See also: https://github.com/tlaukkanen/mobile-trail-explorer ) Mobile Trail Explorer is an application where user can view and record tracks using the mobile phone and GPS device. Recorded tracks can be exported in KML or GPX format. KML file can be viewed in Google Earth application. Mobile Trail Explorer is mainly targeted for recording biking, hiking etc. trails. Software runs on Java platform so it is...
    Downloads: 0 This Week
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  • 5
    The Shrimp suite provides interactive visualizations of graph-based data. Creole (Eclipse plug-in) visualizes Java source code. Jambalaya (Protege plug-in) visualizes ontologies (including OWL), & Stand-Alone Shrimp visualizes RSF/GXL/PRJ/PPRJ files.
    Downloads: 0 This Week
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  • 6
    Yet another COSI Clone is an assembly computer simulation.
    Downloads: 0 This Week
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  • 7
    Java API for implementing any kind of Genetic Algorithm and Genetic Programming applications quickly and easily. Contains a wide range of ready-to-use GA and GP algorithms and operators to be plugged-in or extended. Includes Tutorials and Examples.
    Downloads: 0 This Week
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  • 8
    DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV
    Downloads: 0 This Week
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  • 9
    Collection of Java Applications related to Scientific World. All these applications have their source code available and can be easily changed by other programmers. Visit http://www.hcroboting.com/ for more information.
    Downloads: 0 This Week
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  • 10
    A platform which hosts battles between Fruit War robots - special java programs. The platform accepts source code as robot, and ranks all robots according to battle result. This project has been totally refined and is now hosted at http://robotypo.appspot.com
    Downloads: 0 This Week
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  • 11
    PROSE is a system that performs controlled, systematic, and efficient modification of the code of running Java applications without requiring them to be shut down. PROSE is an infrastructure that supports software adaptation by extending apps at runtime.
    Downloads: 0 This Week
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  • 12
    Bringing BOINC and its projects (SETI@Home, etc.) to the Android mobile platform, through translation to Java. ATTENTION: The code is in pre-alpha stage, and currently meant mainly for BOINC developers.
    Downloads: 0 This Week
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  • 13
    RTP text/t140 Library is a reference implementation for RTP Payload Type for Text Conversation (RFC 4103). The library has source code for encoding and decoding RFC 4103 data, and may be used either as a plug-in to JMF or in a separate RTP sender/receive
    Downloads: 0 This Week
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  • 14
    iScore measures the interestingness of news articles in a limited user environment. It is an online learning algorithm that combines a large set of disparate features to classify documents. To download the source code, please use subversion.
    Downloads: 0 This Week
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  • 15
    Main source code is moved at https://github.com/jpahullo/planetsim. We recommend authors of contributions sections to move your code to github. Since then, contributions remain here for your use at will. PlanetSim is an object oriented simulation framework for overlay networks and services. This framework presents a layered and modular architecture with well defined hotspots documented using classical design patterns.
    Downloads: 0 This Week
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  • 16
    JPACS, Java Processor and Cache Simulator, was developed to give a simple and clear tool to simulate a processor with a complete associative memory cache at ISA level, using direct memory access or using a program written in assembly.
    Downloads: 0 This Week
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  • 17
    An interpreter for the G-code language, which can control a 3-axis Cartesian positioning system (ie for a CNC milling machine) which has electronics compatible with the RepRap project.
    Downloads: 0 This Week
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  • 18
    CNC code generator is a software to generate CNC codes (G & M codes) for maching operations like milling, drilling. At present CNC code generator is limited for end milling. we working on other machining operations like turning, drilling etc.
    Downloads: 6 This Week
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  • 19
    Integrate the power of the fully AJAX enabled technology of ICEfaces into the framework of the ESRI WebADF. No need to code in Javascript or to handle XML communication to build AJAX functionalities. OnlineDemo: http://www2.pch.etat.lu/pchViewer
    Downloads: 0 This Week
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  • 20
    Java wrapper (JNI) for OpenDmx widget (more info www.enttec.com) Source code: java, c++ / Author: Juanjo Lopez
    Downloads: 2 This Week
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  • 21
    ScapeToad is an easy to use application for the cartogram creation. Cartograms are deformed maps where the polygon size is proportional to a given statistical value. ScapeToad reads and writes Shapefiles. See <https://github.com/christiankaiser/ScapeToad> for the latest version of the code.
    Downloads: 1 This Week
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  • 22
    IFS Tools is a set of Java applets for the interactive, graphical construction of iterated function system (IFS) fractals. Output is in the form of IFS code and graphics.
    Downloads: 0 This Week
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  • 23
    Chasm-interop is a set of tools that parses C++ and Fortran 90 source files and automatically generates bridging code to provide for seamless language interoperability.
    Downloads: 2 This Week
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  • 24
    Peruser is a open-source lightweight knowledge application framework. Peruser speaks XML and RDF and is implemented in Java. Peruser code runs within Cocoon, as a standalone webapp, as console programs invoked through ant, or as embeddable java code.
    Downloads: 0 This Week
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  • 25
    A traslator from BPEL4WS processes to YAWL workflows that works with translation patterns. It takes a BPEL document in input and creates a YAWL workflow that rapresents it.
    Downloads: 0 This Week
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