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The Archive of Formal Proofs is a collection of proof libraries, examples, and larger scientifc developments, mechanically checked in the theorem prover Isabelle. It is organized in the way of a scientific journal. Submissions are refereed.

simgi is a simulation engine for stochastic simulations of reactive systems using Gillespie's method written in Haskell.

The Inverse Ocean Model (IOM) is a software system for developing customized data-assimilation systems for numerical ocean models. It has also been used with general purpose hydrodynamic and geodynamic models.