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Showing 7 open source projects for "open source project"
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PF_HP
Prediction of proteinfolding in 2D HP model
Even in the simplified two dimensional HP-model (hydrophob/polar) the prediction of proteinfolding is NP complete. We implement a brute force algorithm with serial and parallel execution to solve short inputs of HP sequences (0-1 bitstrings). Selbst im vereinfachten zweidimensionalen HP-Modell (hydrophob/polar) ist die Proteinfaltung bereits NP-vollständig. Hier implementieren wir einen brute-force Algorithmus zur Lösung kurzer Eingabesequenzen (0-1-Bitstrings) für die... -
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E.N.M.L. means Environmental Noise Model Language. The target of the project is the definition of a XML specification model mainly devoted to electronic acoustic data exchange. ENML aims to format ANY kind of noise measurement.
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Bitte neue Website des aktuellen sourceforge Projekts PF_HP beachten! Please see new Website of the current sourceforge project PF_HP! Selbst im vereinfachten zweidimensionalen HP-Modell (hydrophob/polar) ist die Proteinfaltung bereits NP-vollständig. Hier implementieren wir einen brute-force Algorithmus zur Lösung kurzer Eingabesequenzen (0-1-Bitstrings) für die Proteinfaltung. Spende einen Cappuccino: Bitcoin: 1HqrdnfQgi9B4LW8UEvLAwh7X5gXPCoQ5B Litecoin:...
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LMchess
Language model demonstration using a fixed chess domain
A chess game interface which returns the real time perplexity and entropy at turn intervals. Also provides probability and graphing over time. -
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Vtgrep stands for Visual Tree Grep and is a GUI to tgrep. It allows the user to build graphical representations of tree structures and then translates them into the tgrep syntax. provides search functionality, as well as search and result logging.
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Multi-functional batch sequence aligner incorporating Needleman-Wunsch, Smith-Waterman and Oommen-Kashyap algorithms along with compound alignment of secondary sequences.
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CompuCell3D is a software framework for multimodel simulations of biocomplexity problems. It has been developed as an ongoing project for the Interdisciplinary Center for the Study of Biocomplexity at the university of Notre Dame.
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