Search Results for "written in java"

This package includes BBMap, a short read aligner, as well as various other bioinformatic tools. It is written in pure Java, can run on any platform, and has no dependencies other than Java being installed (compiled for Java 6 and higher). All tools are efficient and multithreaded. BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling arbitrarily large genomes with millions of scaffolds. Handles Illumina, PacBio, 454, and other reads; very high sensitivity and tolerant of errors and numerous large indels. ...

JDiskMark is a powerful and versatile disk benchmarking tool written in Java, designed to help measure the performance and health of your storage drives. Whether you're testing HDDs, SSDs, or network locations, JDiskMark provides reliable insights into your disk's read and write speeds. ubuntu: https://sourceforge.net/projects/jdiskmark/files/0.9.0/jdiskmark_0.9.0_amd64.deb/download rhel/fedora: https://sourceforge.net/projects/jdiskmark/files/0.9.0/jdiskmark-0.9.0-1.x86_64.rpm/download macos: https://sourceforge.net/projects/jdiskmark/files/0.9.0/jdiskmark-0.9.0.pkg/download windows: https://sourceforge.net/projects/jdiskmark/files/0.9.0/jdiskmark-0.9.0.msi/download ZIP releases require java to be installed separately: * 0.6.3-current > jdk25 * 0.5.0-0.6.2 >jdk21 * 0.1-0.4 > Jdk8

Pretty Damn Quick (PDQ) analytically solves queueing network models of computer and manufacturing systems, data networks, etc., written in conventional programming languages. Generic or customized reports of predicted performance measures are output.

This project now lives at https://github.com/dwvisser/jam-daq-code/ Jam is an easy-to-use self-contained data acquisition and analysis system for VME-based (or CAMAC-based) nuclear physics experiments. Jam has an easy, standard GUI for taking and sorting multi-parameter event-based data into 1-d and 2-d histograms.

NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/

See TTS demo at: http://rslp.racai.ro/index.php?page=tts This is an entirely written in JAVA project which includes a set of tools and methods designed to enable Multilingual Text-to-Speech (TTS) synthesis. We currently support English and Romanian but we will soon train more models and make them available for download. If you want to read more about our other NLP and TTS tools check out http://nlptools.racai.ro.

Ank Zyotish is based on Numerology Calculations for predicting various aspects of human on the bases of his/her Date Of Birth. Ank Zyotish performs various mathematical calculations and generate a specific set of predictions related to that person.

The goal of the Fortran-to-Java project is to provide Java Application Programming Interfaces (APIs) to numerical libraries originally written in Fortran (particularly BLAS and LAPACK). The result of this work, JLAPACK, is distributed here.

Smart Calculator is beautifully designed, having both standard and scientific modes of calculations. It is built to run anywhere, as its written completely in Java. It featured different types of Look and Feels, using Java's Swing PLAF library.

Proper is a propositionalization framework written in Java containing several algorithms for generating propositional (and also multi-instance) data from relational databases. It produces data that can be used by the WEKA machine learning workbench.

EMBOSS is a dynamic and comprehensive Open Source package for bioinformatics (DNA and protein sequence analysis, protein structure, phylogenetics, etc.). EMBOSS is written in C, also compatible with C++, and has a separate Java interface (Jemboss)

Ex-Crawler is divided into 3 subprojects (Crawler Daemon, distributed gui Client, (web) search engine) which together provide a flexible and powerful search engine supporting distributed computing. More informations: http://ex-crawler.sourceforge.net

A verilog language compiler written using Java and JavaCC. It produces a netlist, an ascii text file, of all the cell connections. It can compile very large circuits comprised of many modules.

Open Office Server Daemon based on older daemon written in python (oood). Open Office is unstable as a server (memory leaks, not multithreaded, ...), this daemon makes it working in long-term without having to change anything in your code.

jAeroGrapher is an entirely Java-written Application implementing a layout facility to display relational information about airline flights.

Microarray Explorer (MAExplorer) is a Java microarray data-mining bioinformatics program. It includes data management, graphics, statistics, clustering, reports, gene data-filtering, user written MAEPlugins, documentation, tutorials, demo data.

MBAS -- Macro-Biological Analysis System -- provides a set of interoperable tools for aid in the analysis of biological data. The backing database is currently PostgreSQL and the primary language is C, though some data entry tools are written in Java.

Voxapl is a suite of voice-enabled applications supporting voice recognition and text to speech functions for home automation services. It is written in Java and communicates via xAP and/or xPL messaging.

Niamtool v2 is a graphical drawingtool for creating NIAM-diagrams (Niam is Nijssen Information Analyses Method) As far as we know is the only niam-drawingtool in existance (excluding Niamtool v1). It\'s written in java 1.4.

Virtual Camera is an interactive 3D application written in Java, using the Java3D API. The application allows the user to load VRML content, navigate and manipulate objects in a virtual world. A set of useful tools accompanies the application.

Useful and small conversion utility for metric and english measurements. Uses most common measuring units. Older editions written in c++, newer editions in java. Both bytecode and source are available for download.