Search Results for "file structure"

OSRA is a utility designed to convert graphical representations of chemical structures and reactions, as they appear in journal articles, patent documents, textbooks, trade magazines etc., into SMILES or SD file format- a computer recognizable molecular structure You can find links to the binary executables here: https://sourceforge.net/p/osra/wiki/Download/

NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/

Asterix is command line utility and Wireshark plugin used for reading and parsing of Eurocontrol ASTERIX protocol data from stdin, file or network multicast stream. ASTERIX stands for All Purpose STructured Eurocontrol SuRveillance Information EXchange. It is an ATM Surveillance Data Binary Messaging Format which allows transmission of harmonised information between any surveillance and automation system. ASTERIX defines the structure of the data to be exchanged over a communication medium...

The Avalon Cheminformatics Toolkit contains tools to render and canonicalize SMILES and manipulate MOL file and related formats as well as structure fingerprinting.

Advanced Speech Signal Analysis library provides a structure to handle various file formats and a variety of analysis functions commonly used in speech processing.

HOPPscore is a simple application for evaluating the structural quality of theoretical or experimental protein structures. Protein are evaluated by comparing structure fragments to a reference dictionary of fragments from high resolution structures.

PileWorks provides the organizational structure for coordinating several different projects which approach some aspect of Pile Technology. PileWorks defines a set of interfaces and implements some basic infrastructure for Pile engines and agents.