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Showing 8 open source projects for "user"
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genppi
GENPPI: standalone software for creating protein interaction networks
...Our software is compelling because the interaction networks that it creates reflect evolutionary relationships between species and obtained in Average Nucleotide Identity (ANI) analyzes. Also, It allows the user to define how he intends to explore the PP and CN characteristics through various parameters that let on the creation of customized interaction networks. For instance, one can set parameters regarding the genus, metagenome, or pangenome. In addition to the parameterization of GENPPI, it is also the user's choice what set of genomes he is going to study. ... -
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Axiom is a computer algebra system. It consists of an interpreter, a compiler and a library of algorithms. Axiom is an excellent research platform as well as a useful tool for scientific programming.
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Common Lisp Wrapper for Proj
CFFI glue code to use Proj.4 library in Lisp
CFFI glue and bindings for the Proj.4 library to provide a wealth of geographical projections in Common Lisp environment. PROJ.4 is a Cartographic Projections library originally written by Gerald Evenden then of the USGS. CL-PROJ provides complete bindings for this library. -
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An implementation of the Joint Generation Algorithm of Fredman and Khachiyan for the computation of a dual pair of monotone boolean formulas in DNF (hypergraph transversals, extreme rays of polyhedral cones...). User-replaceable oracle.
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OpenAxiom: Scientific Computation System
A system for computer algebra and symbolic mathematics
OpenAxiom is an open source Computer Algebra System. It offers an interactive environment, an expressive programming language, a compiler, a large set of mathematical libraries of interest to researchers and practitioners of computational sciences. -
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cl-gtk-cv
functions for working with geographical data in lisp
Uses opencv to create a zoom-able map, upon which you can place vectorized objects. The idea is to have these objects available in the map, in a list-view and on the REPL. Not complete. No documentation. -
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OKlibrary
Research platform for SAT and other hard problems
The OKlibrary is a research platform for generalised SAT solving. It provides tools to tackle "intractable problems" at the Maxima computer-algebra level and at the C++ level. It also automatically installs a wide range of external software. -
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The Common Lisp Computational Biology (CLCB) package is intended to be a comprehensive, flexible and easy to use library for bioinformatics and computational biology.
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