Showing 5 open source projects for "gnu science"

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  • 1
    genppi

    genppi

    GENPPI: standalone software for creating protein interaction networks

    Our software GENPPI is efficient because, for example, it creates interaction networks from the central genome of 50 species/lineages of Corynebacterium, with an average size of 2200 genes, in less than 40 minutes, on a conventional computer. Our software is compelling because the interaction networks that it creates reflect evolutionary relationships between species and obtained in Average Nucleotide Identity (ANI) analyzes. Also, It allows the user to define how he intends to explore the...
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  • 2
    An implementation of the Joint Generation Algorithm of Fredman and Khachiyan for the computation of a dual pair of monotone boolean formulas in DNF (hypergraph transversals, extreme rays of polyhedral cones...). User-replaceable oracle.
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  • 3
    This is a parser in Java for Lisp S-expressions. An S-expression or sexp (for symbolic expression) is a convention for representing data using parentheses.
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  • 4
    The interactive mathematical programming system GYWOPT is released as free software. It has been developed since early 2000 for experiments with the Integral Basis Method for integer programming by U.-U. Haus, M. Köppe and R. Weismantel.
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  • 5

    OKlibrary

    Research platform for SAT and other hard problems

    The OKlibrary is a research platform for generalised SAT solving. It provides tools to tackle "intractable problems" at the Maxima computer-algebra level and at the C++ level. It also automatically installs a wide range of external software.
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