Search Results for "sparse"
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Showing 18 open source projects for "sparse"
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librsb
A shared memory parallel sparse matrix library including Sparse BLAS.
librsb is a library for sparse matrix computations featuring the Recursive Sparse Blocks (RSB) matrix format. This format allows cache efficient and multi-threaded (that is, shared memory parallel) operations on large sparse matrices. The most common operations necessary to iterative solvers are available, e.g.: matrix-vector multiplication, triangular solution, rows/columns scaling, diagonal extraction / setting, blocks extraction, norm computation, formats conversion. ... -
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BitMagic Library
Compressed bit-sets, sparse bit matrices and algorithms
BitMagic - C and C++ library implementing dynamic bitvectors and bit-set algorithms with several types of on-the-fly, adaptive compression. Designed for use in databases, search systems, data-mining algorithms, scientific projects. The core of the library is C++, but it provides C-compatibility wrappers and can be compiled without C++ runtime. Optimizations for Intel SSE2, SSE4.2 and AVX2. -
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PSICOV
The unofficial binary for PSICOV: Protein Sparse Inverse COVariance
PSICOV (Protein Sparse Inverse Covariance estimation program) is a coevoultion algorithm applied to very large (typically >=1000 sequences) multiple sequence alignments for precise protein structural contact prediction. This is the unofficial precompiled Windows binary for PSICOV compiled by Chengxin Zhang at Fudan University. The source code is copyrighted by David T. -
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Mumps Solver for Visual Studio
Visual studio C and C++ projects to build and use mumps sparse solver
Project consist of a WinForm to modify Mumps source files in order to compile and use them under the 64-bit or 32-bit windows environment and to create necessary VS 2010 projects/solution to compile the source code. On the code tab you can find the sample Mumps solver solution with 6 projects. Two projects are a mumps wrapper library - dynamic and static. And other four projects are testing projects - two are C++ (linking static or dynamic wrapper library) and two are C (again linking... -
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Spherical Harmonics Manipulator
Software to make fast synthesis of spherical harmonics global models
This software computes synthesis of spherical harmonics models on sparse coordinates or grids (provided in a geodetic or geocentric reference system). It exploits basic parallelism using openmp directives. A solution with MPI has not be taken into account since it cannot be so easily manageble by final users. -
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The Meta Matrix Library is a modular designed collection of C libraries. It was developed to provide easy and consistent access to numerical linear algebra software for sparse and dense matrices.
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The igraph library
Library for creating and manipulating graphs
This is a library for creating and manipulating graphs with focus on speedy operations for large, sparse graphs. -
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The Lidy project is a small cross-platform library under LPGL licence, written in C language. It has been designed in order to facilitate the sparse matrices handling.
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PySparse - A Sparse Matrix Library for Python
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A simple CUDA accelerated solver for general dimensional n-body problems. Currently only the conjugate gradient method has been implemented, but more will soon follow.
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A Python environment for large and sparse linear and nonlinear optimization using intuitive interfaces to linear algebra tools and subproblem solvers written in low-level languages. It provides building blocks to experiment with new ideas and algorithms.
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Pydusa is a package for parallel programming using Python. It contains a module for doing MPI programming in Python. We have added parallel solver packages such as Parallel SuperLU for solving sparse linear systems.
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The Optimized Sparse Kernel Interface (OSKI) Library provides automatically tuned sparse matrix kernels, for use by solver libraries and applications. OSKI is part of the BeBOP project on performance tuning and analysis at U.C. Berkeley. (Go Bears!)
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Sparse is a direct method solver for the large sparse matrices that are associated with electrical circuit simulation. It uses LU factorization and handles both real and complex square matrices.It is intended to solve many matrices with the same structure
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MatGen is a matrix generator. It outputs matrices in MatrixMarket file format, taking as input a file describing the matrices´ properties. Currently it supports only random sparse matrices.
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Blit contains a group of highly efficient iterative sparse solvers that can handle multiple right-hand-sides (i.e. block solvers). We will implement BLQMR, BLGMRES and other block algorithms in MATLAB, FORTRAN 90, C/C++, CUDA and OpenCL.
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Elast-O-Matic
Implementation of the finite element method for linear elasticity
Code for solving linear elasticity problems using the finite element method. Current features -Handles complex geometry and boundary conditions -Linear triangle and quadratic quad elements -Sparse matrix CG solver -MPI Parallelism -GMSH Input -VTK Output
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