Showing 3 open source projects for "sample size"

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    SUPERmerge

    SUPERmerge

    ChIP-seq coverage island analysis algorithm for broad histone marks

    ...SUPERmerge allows flexible regulation of a variety of read pileup parameters, thereby revealing how read islands aggregate into areas of coverage across the genome and what annotation features they map to within individual biological replicates. SUPERmerge is especially useful for investigating low sample size ChIP-seq experiments in which epigenetic histone modifications (e.g., H3K9me1, H3K27me3) result in inherently broad peaks with a diffuse range of signal enrichment spanning multiple consecutive genomic loci and annotated features.
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    A group of statistical tools used in the development and structuring of clinical trials by the American Cancer Society. Sample size calculators.
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  • 3
    Sampsize computes sample size and power for surveys, comparative studies including non-inferiority trials and case-control studies.
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