Search Results for "sql command line" - Page 7
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Showing 717 open source projects for "sql command line"
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lr2rmats
Long read to rMATS
lr2rmats is a Snakemake-based light-weight pipeline which is designed to utilize both third-generation long-read and second-generation short-read RNA-seq data to generate an enhanced gene annotation file. The newly generated annotation file could be provided to rMATS for differential alternative splicing analysis. More information can be found at https://sourceforge.net/p/lr2rmats/wiki/Home/ -
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trnsys-fmu
The FMI++ TRNSYS FMU Export Utility
This project has been moved to https://github.com/fmipp/trnsys-fmu This open-source project provides a stand-alone tool for exporting FMUs for Co-Simulation from TRNSYS 17 models. The current release supports FMI version 1.0 and 2.0. Instructions on installation and usage are given in the documentation, which is provided as part of the download. This documentation also contains a tutorial on how to export a TRNSYS model as FMU for co-simulation and how to link it with a simple... -
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SODE
Program to solve differential equations using long Taylor series
Program to generate a program to numerically solve either a single ordinary differential equation or a system of them.It is a Ruby program, now called omnisode, which generates either Ruby, C, C++, Maple or Maxima code. Code can be generated for all languages under Linux. Ruby can be generated under Windows. All can be generated under cygwin, but would need work on execution of Maple. Omnisode itself is Ruby, which is needed in all cases to generate the program. -
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PLC-EMU is a Programmable Logic Controller EMUlator for automation applications on linux with digital/analog IO cards, with C functions, Ladder Diagrams,or IEC61131-compliant Instruction List/Structured Text. It is a cheap and open alternative to PLCs.
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BWA is a program for aligning sequencing reads against a large reference genome (e.g. human genome). It has two major components, one for read shorter than 150bp and the other for longer reads.
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brl2mml
A library to convert between braille and MathML
brl2mml is a library that can perform conversion between braille and MathML. It currently supports UK Maths braille. -
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viewpix
A Landsat 8 scene viewer
Viewpix allows the user to load all eleven bands of a Landsat 8 Level 1 data set into memory concurrently. You can scroll and view each band at full resolution. Change bands instantly with a single key press. Band 8 is 15 meters resolution, all other bands are 30m resolution. A 30m resolution gray scale scene is generated by Viewpix and is presented as band 12. Each Landsat 8 scene is roughly 190 X 180 kilometers. Viewpix was originally written as a simple platform to test GPU... -
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cfPred
Chou & Fasman algorithm implemented using C language.
Chou & Fasman algorithm implemented using C language. It is a CUI tool used for protein secondary structure prediction. -
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Logic Lab
This is a suite of mathematical software solvers GUI
This is a suite of mathematical software solvers interface on DLV and other command-line solvers. It helps researchers and students to better comprehend their declarative definitions published on papers. The user can have links to the related papers and to the software of the corresponding definitions. -
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rawi2ctool
RAW I2C command line tool for debug, test and more
This is a Linux command line tool to do raw I2C accesses to a bus, IF SUPPORTED BY THE ADAPTER, to probe the bus, read or write some data, detect glitches, do a bench, program an EEPROM with the required blocksize, test the I2C bus driver, ... Raw I2C mode enables data frames that are not supported by SMBus and related tools (such as i2cget, i2cset, i2cdump) -
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mkmap
A map maker via online map services
Mkmap is a map maker by downloading map tiles from online map services, like google maps, and combining into a single large picture file. It accepts the latitude and longitude coordinates, then downloads and merges map tiles. The idea of mkmap is to generate a larger map than the size of a browser screen. So the map could be easily printed or viewed in an off-line device. Mkmap supports Linux and Windows platform. -
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Chapel
a Productive Parallel Programming Language
Chapel is an emerging parallel programming language whose design and development are being led by HPE in collaboration with academia, computing labs, and industry. Chapel's goal is to improve the productivity of parallel programmers, from laptops to supercomputers. **Please note that Chapel development has moved to GitHub** -
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cgtkcalc
A simple calculator for complex number calculation.
A simple scientific calculator for complex number calculation. It requires the GTK+ toolkit. -
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nccmp
Compare two NetCDF files in-place.
We've moved to Gitlab! (gitlab.com/remikz/nccmp) Compares two NetCDF files in-place to find specific variables, dimensions and/or attributes that differ. Highly recommended for any test-driven environment and regression testing large datasets. -
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This software is for processing binary Doppler radar data in, but not limited to, DORADE sweepfile format. The software can modify metadata and moment data using quality control routines and extract moment data as comma-delimited ASCII files.
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Barracuda is a high-speed sequence aligner based on Sanger's BWA and utilizes the latest Nvidia CUDA architecture for accelerating alignments of sequence reads generated by next-generation sequencers.
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experix laboratory control system
instrument control, data acquisition display and analysis
Experix is a command-line driven environment for laboratory data acquisition and device control and graphical presentation and analysis of data. Written in C for GNU-Linux . Tested on PC and Raspberry Pi. The core is written very generally in order to support applications by means of script files. Device interfaces: PCMCIA daq (2 devices tested) via kernel module with interrupt handler and memory-mapped data; USB daq (1 device tested) using libusbx; running an equipment servicing program via pipes. ... -
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Puff is an atmospheric dispersion model using a lagrangian particle-tracking method, used primarily for simulating volcanic ash cloud trajectories.
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Calculation of radiation view factors by adaptive integration. A cross-platform port of the public-domain code by George Walton.
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ADMS is a code generator that converts electrical compact device models specified in high-level description language into ready-to-compile c code for the API of spice simulators. Repository migrated to: https://github.com/Qucs/ADMS For checkout do: git clone https://github.com/Qucs/ADMS.git
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**** This page is not used for this project any longer. *** Please update your bookmarks and go to https://github.com/UUPharmacometrics/PsN
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libunits
ultimative units calculation and conversion tool and library
The ultimative shared library to do calculations(!) and conversions with any units! Includes all SI and pseudo SI units and thousands of US, Imperial and other units. 10th of thousands of typical dimensions are recognised as well. An easy API for calculations is available as well as a ncurses based calculator providing RPN and algebraic mode. -
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Suite of tools for DNA sequence analysis - searching (EST, mRNA, sequencer reads); aligning (ESTs, mRNA, whole genome); and analysis (repeats, kmers).
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LTL3BA
Translator of LTL formulae to Büchi automata based on LTL2BA
LTL3BA is a translator of LTL formulae to Büchi automata. It is based on the popular tool named LTL2BA written by Denis Oddoux and Paul Gastin (available at http://www.lsv.ens-cachan.fr/~gastin/ltl2ba/). LTL3BA further improves LTL2BA's performance. Most modifications are described in the paper: T. Babiak, M. Křetínský, V. Řehák, and J. Strejček: LTL to Büchi Automata Translation: Fast and More Deterministic, in Proceedings of TACAS 2012, volume 7214 of LNCS, pages 95-109....
