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Showing 53 open source projects for "packages"
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LAMMPS
Public development project of the LAMMPS MD software package
...It supports many interaction models, including pair potentials, many-body potentials, reactive force fields, bonded interactions, long-range electrostatics, and user-extendable packages. LAMMPS is script-driven, so users can define simulation geometry, force fields, integration methods, output, and analysis behavior through input files. Its main value is combining broad scientific flexibility with scalable parallel performance for complex molecular and mesoscale simulations. -
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Octave Forge
A collection of packages providing extra functionality for GNU Octave
Octave Forge is a central location for collaborative development of packages for GNU Octave. The Octave Forge packages expand Octave's core functionality by providing field specific features via Octave's package system. See https://octave.sourceforge.io/packages.php for a list of all available packages. GNU Octave is a high-level interpreted language, primarily intended for numerical computations. It provides capabilities for the numerical solution of linear and nonlinear problems, and for performing other numerical experiments. ... -
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Intelligent formulas: Numeric and symbolic calculations in LibreOffice and Openoffice Writer. The iMath extension to Libreoffice and OpenOffice enables numeric and symbolic calculations inside a Writer document. If your OS can install .deb packages, have a look at my PPA http://launchpad.net/~jrheinlaender/+archive/ppa
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Avogadro
An intuitive molecular editor and visualization tool
Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science and related areas. It offers a flexible rendering framework and a powerful plugin architecture. -
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stkpp
C++ Statistical ToolKit
STK++ (http://www.stkpp.org) is a versatile, fast, reliable and elegant collection of C++ classes for statistics, clustering, linear algebra, arrays (with an Eigen-like API), regression, dimension reduction, etc. Some functionalities provided by the library are available in the R environment as R functions (http://cran.at.r-project.org/web/packages/rtkore/index.html). At a convenience, we propose the source packages on sourceforge. The library offers a dense set of (mostly) template classes in C++ and is suitable for projects ranging from small one-off projects to complete data mining application suites. -
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Euler Math Toolbox
Numerical and Symbolic Math Tool
Euler is a powerful all-in-one numerical software and includes Maxima for seamless symbolic computations. Euler supports Latex for math display, Povray for photo-realistic 3D scenes, Python, Matplotlib and C for scripting, and contains a full programming language. Features include libraries for numerical algorithms, optimization, plotting in 2D and 3D, graphics export, a complete help system, tutorials and examples. Euler runs in Windows natively, or in Linux via Wine. It is completely... -
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QChartist
Free and Open Source Technical Analysis Charting Software
QChartist is a free and open source technical analysis charting software. Its purpose is to provide a complete set of tools to perform technical analysis on charts and data. It helps to make forecasts mainly for markets but can also be used for weather or any quantifiable data. The program is flexible and its functionalities can be easily extended. You can draw geometrical shapes on your charts or plot programmable indicators from your data. It is also possible to filter or merge data. I got... -
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The LaTeX Equation Compiler is a preprocessor for LaTeX files that enables numeric and symbolic calculations. It reads equations specified by special keywords in the LaTeX file, manipulates them and calculates numeric values of variables. If your OS can install .deb packages, have a look at my PPA http://launchpad.net/~jrheinlaender/+archive/ppa
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CalculiXforWin
Open-Source Multiphysics FEA (FEM) Package
CalculiX Binaries for MS Windows, made with CYGWIN and ARPACK libraries. CalculiX is most popular FEA open-source package (like Code-Aster and Elmer-FEM). it is comparable in features with most known commercial packages like ANSYS, NASTRAN, Abaqus, etc. Good for structural, mechanical, thermal and fluid applications (trusses, plates, frames, shells, solid bodies). It has powerful nonlinear capabilities (including tension/compression only material like concrete) and most types of analysis (modal, thermal, buckling, coupled, etc) . See home page at http://www.dhondt.de New versions can be obtauned here: http://calculixforwin.blogspot.com/2015/05/calculix-launcher.html PS Appimages for Scilab, wxMaxima and GNU Octave were added -
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...SpecTcl is relatively easy to learn, and is based on top of a very open C++ histogramming class framework. SpecTcl has been developed under NSF grant PHY-9528844 and DOE grant DE-SC0000661 Note that as of July 2023, all future development and release packages will be occur at https://github.com/FRIBDAQ/SpecTcl
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The NSCL Data Acquisition system is a general purpose nuclear physics data acquisition system in use at several university labs and, of course, the National Superconducting Cyclotron Laboratory at Michigan State University. The development of the NSCLDAQ is currently funded by DOE grant DE-SC0000661 Note that as of July, 2023 all development and release packages will be hosted at https://github.com/FRIBDAQ/NSCLDAQ
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GDAL wheels for linux
GDAL wheels for python and C/C++ projects (Linux only)
To use precompiled wheels: 1) go to releases (Files) and download tarball needed; 2) install it with command: python3 -m pip install /path/to/wheel.whl Or simply use URL in pip: python3 -m pip install https://sourceforge.net/projects/gdal-wheels-for-linux/files/GDAL-3.1.4-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.whl/download URL may be found under "View details" button (i) To use GDAL in C/C++ project you need to link gdal lib AND all libs located at dir GDAL.libs (usually this folder resides inside python site-packages) To compile your own wheels see information given at forefather project: https://github.com/youngpm/gdalmanylinux Usually this is done via command `make wheels` GDAL wheels for Windows are provided by Christoph Gohlke at https://www.lfd.uci.edu/~gohlke/pythonlibs/#gdal Built with PROJ (proj.db is included), GEOS, EXPAT. ... -
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qmol
A simple molecular weight calculator
...See the features list below for more details or consult the wiki page: https://sourceforge.net/p/qmol/wiki/Home/. For Windows binary and source code see the files section: https://sourceforge.net/projects/qmol/files/ Binary packages (rpm/deb) for openSUSE Leap 15.2-42.2, xUbuntu 20.10-19.10, 17.04, Fedora 33, CentOS 8, Scientific Linux 7, and Debian 10.0-8.0 can be found at: http://download.opensuse.org/repositories/home:/lineinthesand/ -
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DBSolveOptimum
The software for systems biology/pharmacology modeling
DBSolveOptimum is a stand-alone software tool for the construction and analysis of mathematical models of biological systems. It is a succession and extension of DBSolve 5 and DBSolve 7, which were popular tools for systems biology. In addition to the capabilities of these software packages, DBSolveOptimum is implemented with new tools for extended data analysis and multiple simulations, which are important for simulation of virtual clinical trials and application of modern modeling techniques, like quantitative systems pharmacology, to problems arising in drug research and development. By this time, DBSolveOptimum has been successfully tested and applied for the development and analysis of both systems pharmacology and conventional PK/PD models of drugs. ... -
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KLatexFormula is an easy-to-use graphical application for generating images (that you can drag and drop, copy and paste or save to disk) from LaTeX equations.
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Rocstar Multiphysics Application
Parallel coupled multiphysics simulation application
Rocstar is a multiphysics simulation application designed to do fluid-structure interaction (FSI) across moving, reacting interfaces. Rocstar couples multiple domain-specific simulation packages and disparately discretized domains and provides several simulation-supporting services including conservative and accurate data transfer, surface propagation, and parallel I/O. Rocstar is MPI parallel and routinely executes large simulations on massively parallel platforms. Rocstar was originally developed at the University of Illinois Center for Simulation of Advanced Rockets (CSAR) under Department of Energy ASCI funding. ... -
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MIRA V5 is available only on GitHub! The V4 version released here on SourceForge stay up as some automated release fetching packages rely on V4. MIRA - Sequence assembler and sequence mapping for whole genome shotgun and EST / RNASeq sequencing data. Can use Sanger, 454, Illumina and IonTorrent data. PacBio: CCS and error corrected data usable, uncorrected not yet.
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As of August 2018 Spheral++ has moved to Github -- please see the current repository at https://github.com/jmikeowen/spheral We are leaving a frozen version here on SourceForge for historical reasons. Spheral++ provides a steerable parallel environment for performing coupled hydrodynamical & gravitational numerical simulations. Hydrodynamics and gravity are modelled using particle based methods (SPH and N-Body).
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OpenRTDynamics
A framework for implementing real-time control systems
...Besides, this framework properly handles multiple threads, their communication, allows to synchronise control systems to external events (e.g. variable timers or incoming network packages) and provides many other nice features. Because of a high-level schematic-description language -- in form of provided Scilab commands -- only a minimal implementation-effort (no error-prone C-programming) is required. -
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RPM files of CalculiX, a free FEM package. See www.dhondt.de for the non-rpm base packages (cgx, ccx)
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Nifty Sim is a high-performance nonlinear finite element solver, developed at University College London. A key feature is the option of GPU-based execution, which allows the solver to significantly out-perform equivalent commercial packages.
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STARucn
Monte-Carlo simulation for ultra-cold neutrons
STARucn (Simulation of Transmission, Absorption and Reflection of ultracold neutrons) is a Monte-Carlo software designed to simulate experimental setups and guides for ultra cold neutrons. It relies heavily on CERN's ROOT packages. Developing team : Benoit Clément, LPSC/UJF Damien Roulier, ILL/UJF -
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scipion-xmipp
Image processing framework to integrate EM software packages.
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated into Scipion and contains the algorithms in the core libraries and command line programs. -
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Unofficial ParaView SDK
Unofficial ParaView Development Installation
The objective of this project is to provide the "ParaView Development Installation" packages that Kitware hasn't released since ParaView 3.8.1: http://www.paraview.org/files/v3.8/ For more details, please visit our wiki: https://sourceforge.net/p/unofficial-paraview-sdk/wiki Note: This project was moved from Google Code, where it was named "unofficial-paraview-dev-install". = License and Legal = This project is not endorsed by Kitware, the makers and owners of ParaView. ... -
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mhGui
A gui for linux users of miniHomer, a GPS tracker
...As the tool is written in QT/jquey/HTML/javascript, there is a good change that it will run on other OSes. Version 1.0 should be good enough to be offered to the public Please see the files section for RPM packages
