Search Results for "data structures"
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Showing 41 open source projects for "data structures"
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ImHex
A Hex Editor for Reverse Engineers, Programmers
ImHex is a Hex Editor, a tool to display, decode and analyze binary data to reverse engineer their format, extract informations or patch values in them. What makes ImHex special is that it has many advanced features that can often only be found in paid applications. Such features are a completely custom binary template and pattern language to decode and highlight structures in the data, a graphical node-based data processor to pre-process values before they're displayed, a disassembler, diffing support, bookmarks and much much more. ... -
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CGAL
The Computational Geometry Algorithms Library
...These algorithms are useful in a wide range of applications, including computer aided design, robotics, molecular biology, medical imaging, geographic information systems and more. CGAL features a great range of data structures and algorithms, including Voronoi diagrams, cell complexes and polyhedra, triangulations, arrangements of curves, surface and volume mesh generation, spatial searching, alpha shapes, geometry processing, and many more. The use of these result in beautiful, visually complex and accurate representations. -
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OpenLoco
An open source re-implementation of Chris Sawyer's Locomotion
...The reimplementation efforts of OpenLoco are gradual, aiming to ultimately rewrite the entire game in C++. In the earlier years of the project, the in-game UI has been completely reimplemented, and most of the underlying data and object structures have been uncovered. Recent efforts have focussed on reimplementing the game (command) logic. -
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MuJoCo
Multi-Joint dynamics with Contact. A general purpose physics simulator
...The engine provides a robust C API optimized for real-time computation, making it suitable for scientific research and advanced simulation environments. MuJoCo’s core architecture is performance-tuned and utilizes preallocated data structures created through an XML-based compiler. The platform includes built-in interactive visualization using OpenGL and a native graphical interface for analyzing and testing simulations. Additionally, it offers extensive utility functions for physics computation, Python bindings for developers, and a Unity plug-in to enable integration with game engines and visualization tools. -
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Object-oriented crystallographic library and program, for the analysis of Crystal structures from scattering experiments: optimized scattering computation, Graphical interface for structures and data, global optimization algorithms.
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Software and codes created in "Laboratorio de Química Computacional" of "Facultad de Ciencias y Tecnología" of "Universidad de Carabobo"
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Charmol
Program for molecular graphics
Charmol is a cross-platform GUI/command-line based program for making high-quality pictures of molecular structures, nowadays working on Linux, MacOS and Windows. As output, it produces POV-Ray rendered images or files in VRML format. Charmol is capable of making pictures containing: - from small- to large-size molecules - more molecules together (different settings possible) - orbitals using molden and fchk files (GTO functions up to 'h' angular momentum supported) -... -
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TexGen is a geometric textile modelling software package to be used for obtaining engineering properties of woven textiles and textile composites. Citing TexGen We would be grateful if you could acknowledge use of TexGen where appropriate and suggest using one of the following references: L P Brown and A C Long. "Modelling the geometry of textile reinforcements for composites: TexGen", Chapter 8 in "Composite reinforcements for optimum performance (Second Edition)", ed. P Boisse,...
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jarduino
Generates C++ code from Arduino .dbc files
jarduino creates C++ code from .dbc files suitable for import into the Arduino IDE. It generates C structures representing each message and functions to build and parse the messages. It also provides a visualisation of the message, mapping the signals to the bits in the data message. -
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RegexToNFA
Compiles regular expressions into modular NFA
...This was originally an extended re-implementation of the "front-end" part in the following paper: https://www.computer.org/csdl/proceedings/reconfig/2008/3474/00/3474a073-abs.html It has since grown to include conversion of a set of NFAs to a DFA; compilation of NFAs to instruction suitable for simulation; and compilation of a DFA to hash-based data structures for a simulator. -
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An open source framework for LC-MS based proteomics and metabolomics. OpenMS offers data structures and algorithms for the processing of mass spectrometry data. The library is written in C++. Our source code and wiki lives on GitHub (https://github.com/OpenMS/OpenMS).
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The Integrating Vision Toolkit (IVT) is a powerful and fast C++ computer vision library with an easy-to-use object-oriented architecture. It offers its own multi-platform GUI toolkit. OpenCV is integrated optionally. Website: http://ivt.sourceforge.net
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concordia
Powerful search library, best suited for computer-aided translation
...It uses a RAM stored index, which takes up approximately 600MB of memory for a corpus of 2 million sentences. It is based on the idea of a suffix array, enhanced by the presence of other auxiliary data structures. The effects are stunning - Concordia is able to do simple substring lookup at the pace of 5000 queries per second (on personal PC) - a speed which can not be achieved by any other search library. Moreover, Concordia can perform its own "concordia search". For a given input sentece, all substring matches covering this sentence are retrieved. ... -
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Combined Two-Wavelenght X-ray Tool
Complex data processing X-ray metods for analysis thin-film structures
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This project contains some programs that designed to process gravity data through applying of the reductions to determine the Bouguer gravity anomaly and to model the subsurface structures by forward and inverse methods as well as some programs to determine geodetic parameters from geopotential models. This project may be useful in Geodesy and Geophysics.
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irayMol
Molecular visualization
Analyses and Interactive visualizations of the structures, functions and actions of biomolecules including molecular surface computation, and protein-ligand interface and protein-ligand docking where the ligand could a small compound, a nucleic acid, membrane and other proteins, written in C++/Qt/openGL/GLSL with more than 125,000 lines of codes. In addition to Qt, the only external library needed is GSL everything else is coded from the scratch. -
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MathFu
C++ math library developed primarily for games focused on simplicity
MathFu is a small, header-only C++ math library optimized for games and real-time graphics on mobile and desktop. It provides fixed-size vector, matrix, and quaternion types with APIs that mirror the operations you actually use in inner loops—dot, cross, normalize, transforms, and projections. Implementations are carefully tuned to leverage SIMD instruction sets such as SSE and NEON while preserving a clean fallback path for portability. Because types are fixed at compile time, the compiler... -
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RDKit
Open-Source Cheminformatics and Machine Learning
A collection of cheminformatics and machine-learning software written in C++ and Python. NOTE: the RDKit source code and downloads are now in github: https://github.com/rdkit/rdkit The core algorithms and data structures are written in C++. Wrappers are provided to use the toolkit from either Python or Java. Additionally, the RDKit distribution includes a PostgreSQL-based cartridge that allows molecules to be stored in relational database and retrieved via substructure and similarity searches. -
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IRST LM Toolkit
A toolkit for language modeling.
...Please visit the new IRSTLM official website: http://hlt-mt.fbk.eu/technologies/irstlm IRSTLM: A tool for the estimation, representation, and computation of statistical language models. IRSTLM, the IRST Language Modeling Toolkit, features algorithms and data structures suitable to estimate, store, and access very large n-gram language models. Our software has been integrated into a popular open source Statistical Machine Translation decoder called Moses, and is compatible with language models created with other tools, such as the SRILM Tooolkit. -
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gMol
gMol molecular graphics
We've moved to https://github.com/tjod/gMol/wiki gMol is an interactive visualization system used to display and manipulate 3-dimensional models of scientific data, such as molecular structures and surfaces. It contains both OpenGL and web browser widgets that enable flexible user interfaces. -
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The library for utilization of Minimal Quadtree format for storing very large sparse matrices. Please see the paper referenced below for the description of a problem. Corresponding papers: Tree-based Space Efficient Formats for Storing the Structure of Sparse Matrices (I. Šimeček, D. Langr, P. Tvrdík), In Scalable Computing: Practice and Experience, volume 15, 2014. Space Efficient Formats for Structure of Sparse Matrices Based on Tree Structures (I. Šimeček, Daniel Langr, Pavel...
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BiomeNet
BAYESIAN INFERENCE OF METABOLIC DIVERGENCE AMONG MICROBIAL COMMUNITIES
...The basic idea is that the mixture components of the model (metabolic reactions, subnetworks, and networks) are shared across all groups (microbiome samples), but the mixture proportions vary from group to group. Through this framework, the model can capture nested structures within the data. BiomeNet is unique in modeling each metagenome sample as a mixture of complex metabolic systems (metabosystems). -
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OpenCMISS-Zinc
A Library for Interactive Modelling and Visualisation
...Models are represented in Zinc as mathematical fields defined over domains, including finite elements with support for high-order basis functions, complex parameter mappings and time variation, and image-based fields. Further fields can be defined by mathematical expressions and algorithms on existing fields, including image processing filters. Zinc model data structures are dynamic, supporting interactive applications which programmatically create, destroy and modify parts of models. -
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allink
Software for data analysis, image processing, simulations, solver.
...Matematica) performs math operations on vectors and matrices for smoothing, interpolation, convolution, image processing... VarData) manipulate a structure of points connected by links. Addraw) openGL engine. ElPoly) analyze mechanical properties of polymer and membrane like structures. Addyn) perform molecular dynamics and Monte Carlo simulations and has a solver for 4th oder PDE. Avvis) perform all the operation of Matematica on different sets of data visualized on a Qt graphical interface. DrImage) image manipulation on the Matematica filters. The program is intended to use as less as possible external libs (optional: openGL, gsl, fftw, cgal, png, tiff, boost, MPI, Qt...). -
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CAPLET
GDS visualization and parallelized capacitance extraction
Project CAPLET is a capacitance extraction toolkit that extract capacitance at field-solver accuracy. CAPLET can directly handle GDS2 layout files into capacitance matrices in both GUI and command line interfaces. The internal extraction algorithm is specialized for VLSI interconnect structures but not exclusively, as long as the structure is of Manhattan geometry and embedded in a uniform dielectric material.
