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Showing 4 open source projects for "clustal-omega"

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    LTL3BA

    Translator of LTL formulae to Büchi automata based on LTL2BA

    ..., 2012. LTL3BA supports output in Hanoi Omega-Automata (HOA) format since version 1.1.0. More information about HOA can be found here: http://adl.github.io/hoaf/ In order to compile LTL3BA, the BuDDy library (http://sourceforge.net/projects/buddy/) is needed.
    Downloads: 0 This Week
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  • 2

    MSA-CUDA: multiple sequence aligner

    multiple sequence alignment on CUDA-enabled GPUs.

    This project is not active any more since we failed to get the permit from the Clustal team to distribute our software. You can refer to the paper "Yongchao Liu, Bertil Schmidt, Douglas L Maskell:MSA-CUDA: multiple sequence alignment on graphics processing units with CUDA. ASAP 2009" for more details.
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  • 3
    IMAS is a Visual Analytics system for the discovery of knowledge in genomic information. IMAS enables genomic scientists to rapidly analyze and visualize a set of microbial genomic sequences using tools such as Glimmer, Blast, Clustal-W, Primer3.
    Downloads: 0 This Week
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  • 4
    MatrixGen is a Bioinformatics application used to generate scoring matrices from analysis of aligned Amino Acid and DNA data sets. These matrices can then be used by Clustal to generate more accurate alignments. Based upon the Henikoff BLOSUM method.
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