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Even in the simplified two dimensional HP-model (hydrophob/polar) the prediction of proteinfolding is NP complete. We implement a brute force algorithm with serial and parallel execution to solve short inputs of HP sequences (0-1 bitstrings).
Selbst im vereinfachten zweidimensionalen HP-Modell (hydrophob/polar) ist die Proteinfaltung bereits NP-vollständig. Hier implementieren wir einen brute-force Algorithmus zur Lösung kurzer Eingabesequenzen (0-1-Bitstrings) für die...
The Advanced Algebraic Language (AAL) is a very dynamic programming language designed to fill the void that has appeared between mainstream languages and algebra. As a result its main focus is ease of use for math problems.
To download AAL check out the source code repository. There are versions available for windows and linux with both 32 and 64 bit native binaries:
http://svn.code.sf.net/p/aal-lang/code/trunk/bin/