Search Results for "collections"

COLMAP is a general-purpose Structure-from-Motion (SfM) and Multi-View Stereo (MVS) pipeline with a graphical and command-line interface. It offers a wide range of features for the reconstruction of ordered and unordered image collections. The software is licensed under the new BSD license.

OpenVigil provides a webinterface to analyse pharmacovigilance data, i.e., spontanous or systematic collections of treatments (drugs) and observed adverse events ("drug side effects"). FDA Adverse Event Reporting System (AERS) and other pharmacovigilance data (e.g., Canadian or German) are supported. The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting ratio or reporting odds ratios) and export to spreadsheets programs like Microsoft Excel or statistics programs like R. ...

...In 2015, 450 biological collections worldwide use Specify Software for collections data management. An iPad app, Specify Insight is also available.

Applications to support the efficient capture of data from natural science collections specimens (particularly entomological collections), by facilitating pre-capture of data reflecting the storage structure of the collection, imaging of the specimens to separate data capture from specimen handling, and community sourcing transcription of hand written label data. Designed and written by a team at the Museum of Comparative Zoology.

CARGO is a high-level framework that can semi-automatically generate software systems optimized for the compressed storage of arbitrary types of large genomic data collections. Straightforward applications of CARGO methods to compress FASTQ and SAM format archives require only a few lines of code, produce solutions that match and sometimes outperform specialized format-tailored compressors, and scale well to multi-TB datasets.

...It's GUI enables intuitive access and direct graphical feedback, making it useful in a classroom situation and the like. Simulation processing is done in parallel, utilizing parallel collections introduced in scala 2.9. This application has been created as part a bachelor-thesis at the Hamburg University of Applied Sciences. The thesis is available at: http://opus.haw-hamburg.de/volltexte/2012/1843/pdf/ba_dahl.pdf Future plans: - Operator grouping (enables repeated blocks) - Editable library

RssGsc (Rank Sum Statistics for Gene Set Collections) is a bioinformatics tool used to find meaningful gene sets using a ranked list of genes (obtained form an experiment).

Plexus is a Java library with specifications and implementations for generic graph data structures. Like the Java Collections Framework, vertices and edges are containers for arbitrary user-defined objects.

primeHandle is a set of data management tools in support of the PrIMe Initiative (http://primekinetics.org). primeHandle includes graphical user interfaces for searching through data collections, editing and submitting data to the PrIMe Data Depository.

IBISA stands for "Image-Based Identification/Search for Archaeology". It is free software aiming to manage collections of photos of archaeological objects and find similarities between these objects by means of a simple graphical user interface.

A collection of miscellaneous Java utilities, including a standard enumerated type base class, multithreading utilities, graph utilities, and several generalizations / augmentations of the Java Collections API (e.g. MultiMap, ListDiff).

BioMa is a specimen based Biodiversity database Manager. It is designed to store, organize, and manipulate biodiversity-related scientific data, either for the purposes of museums, scientific collections, or research projects.

pubmgr is a Web based Content Management System (CMS) that stores, organizes, and provides access to scientific publication collections.

Sciense Searcher is a system that lets you search, organize and share bibliographic cites of research articles, books, booklets, collections, manuals, thesis, proceedings, technical reports, unpublished publications and misc.

A collection of various Java utility interfaces and classes, concentrating on collections, data structures, algorithms, number theory, matrices, and other mathematical constructs.

JDigraph is a Java library for representing and working with directed graphs and paths hosted at http://jdigraph.dev.java.net . The API is patterned after the Java collections API.