819 programs for "3270 terminal for linux" with 2 filters applied:

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  • 1

    wmtsa-python

    Discrete wavelet methods for time series analysis using python

    Several python libraries implement discrete wavelet transforms. However, none of them, or at least none that I know, is aimed at scientific use. This library aims at filling this gap, in particular considering discrete wavelet transform as described by Percival and Walden. This module started as translation of the wmtsa Matlab toolbox (http://www.atmos.washington.edu/~wmtsa/), so most naming conventions and most of the code structure follows their choices. The code uses a mix of python and...
    Downloads: 0 This Week
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  • 2
    MolTPC

    MolTPC

    MolTPC provides a solution for fully automatic tautomer enumeration.

    Besides all their conformational degrees of freedom, drug-like molecules and natural products often also undergo tautomeric interconversions. Compared to the huge efforts made in experimental investigation of tautomerism, open and free algorithmic solutions for prototropic tautomer generation are surprisingly rare. The few freely available software packages limit their output to a subset of the possible configurational space by sometimes unwanted prior assumptions and complete neglection of...
    Downloads: 1 This Week
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  • 3

    esf

    electrostatic field package

    This is an electrostatic field package for GNU Octave. It contains functions that can calculate capacitance matrix of metal blocks, inductance matrix of metal bounds, impedance matrix of metal dipoles (antennas), and so on.
    Downloads: 0 This Week
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  • 4
    An implementation of the Kernel-based Orthogonal Projections to Latent Structures (K-OPLS) method for MATLAB and R. The supplied functionality includes e.g. cross-validation, kernel parameter optimization, model diagnostics and plot tools.
    Downloads: 0 This Week
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  • 5

    cnvOffSeq

    detecting & genotyping intergenic CNVs using off-target exome data

    cnvOffSeq is a set of Java-based command-line tools for detecting and genotyping intergenic copy number variation (CNV) using off-target data from whole-exome sequencing experiments.
    Downloads: 0 This Week
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  • 6

    Pugsly PubChem Client

    Command-line, PubChem PUG client, written in Python

    Client to the PubChem Tool (PCT), The Power User Gateway (PUG). Written in Python and developed for use with Linux.
    Downloads: 0 This Week
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  • 7

    Pyntrez NCBI Database Client

    Command-line, Entrez, NCBI e-utilities client, written in Python

    Comman-line client to Entrez, e-utilities, written in Python, developed for Linux
    Downloads: 0 This Week
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  • 8

    arkimet

    a set of tools to organize, archive and distribute data files

    arkimet has moved to https://github.com/ARPA-SIMC/arkimet
    Downloads: 0 This Week
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  • 9
    SPDLib - LiDAR & TLS Processing Tools
    A library of tools and API (C++ and Python) for the storage and processing of large 3D laser scanning (LiDAR, ALS, TLS) datasets using a pulse based spatially indexed file format (SPD) which support for both discrete return and full waveform datasets. Code has moved to https://bitbucket.org/petebunting/spdlib
    Downloads: 2 This Week
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  • 10
    A python framework for fuzzy inference computations
    Downloads: 1 This Week
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  • 11

    grepp

    An ultimate text-analysing tool

    A command line tool for text file analyis, filtering, splitting and reporting. Runs under Java (1.5+), supports plugins written in Groovy. Has nix and win batch files in distributions.
    Downloads: 0 This Week
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  • 12

    octave-emf

    Electromagnetic field simulator

    Octave package for electromagnetic circuit and field simulator that computes circuit parameters and specified field distribution.
    Downloads: 0 This Week
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  • 13

    Infix to Postfix Converter

    Infix to Postfix Converter & Calculator

    This application accepts as an input an infix expression consisted of signed or unsigned numbers, parenthesis and operators. It converts the infix expression to postfix and then calculates the result of the expression.
    Downloads: 0 This Week
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  • 14
    Small GAP package for converting Petri nets to finite state automata and transformation semigroups.
    Downloads: 0 This Week
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  • 15

    Text Analyzer

    Text analyzing software

    An application developed in C using the list and the AVL tree data structures, which analyzes a text (.txt file) giving the following information as an output: 1. the total occurrences of every word in the text 2. the exact line of every occurrence of every word 3. the exact position in the line of every occurrence of every word 4. the exact paragraph of every occurrence of every word 5. the exact sentence of every occurrence of every word The output is also written in a...
    Downloads: 0 This Week
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  • 16
    lib_data_io is a set of PHP libraries designed to easily move complex sets of data between PHP array data structures and a variety of sources and destinations including JSON, XML, ICAL, MySQL, HTML, Trac WIKI, text, LDIF, and plot images.
    Downloads: 0 This Week
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  • 17
    GGI stands for "General Graphics Interface", and it is a project that aims to develop a reliable, stable and fast graphics system that works everywhere. We want to allow any program using GGI to run on any platform requiring at most a recompile.
    Downloads: 7 This Week
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  • 18

    PolySim

    Polymer simulation utilites

    ... to visualize with pymol. For specific non-pdb input/output of 2nd program there are convertation utils also available. Programs are expected to compile in gcc under cygwin or pure linux environment. Scripts to run many copies of program under pbs/torque cluster system are also available.
    Downloads: 0 This Week
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  • 19
    The software annotates text with 41 broad semantic categories (Wordnet supersenses) for both nouns and verbs; i.e., it performs both sense disambiguation and named-entity recognition. The tagger implements a discriminatively-trained Hidden Markov Model.
    Downloads: 0 This Week
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  • 20

    bagemass

    Bayesian age and mass estimates for transiting planet host stars

    Source code, makefile and README for installation of software used for the analysis in Maxted, Serenelli & Southworth, "Bayesian mass and age estimates for transiting exoplanet host stars", A&A 575, 36, 2015.
    Downloads: 0 This Week
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  • 21

    MThreaded/OO NIST Statistical Suite

    Multithreaded & OO NIST Statistical Test Suite (C++ version)

    This project is a Multithreaded & OO C++ version of NIST Statistical Test Suite which has been developed by Juan Soto in 1999. This is object oriented so that you can use it easily in your programs. Also you can use the power of parallelism cause it is multithreaded. Enjoy it!
    Downloads: 0 This Week
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  • 22
    FIAP

    FIAP

    Fully Integrated Annotation Pipeline

    FIAP (Fully Integrated Annotation Pipeline) is a fast bacterial genome multithreading annotation pipeline written in Perl that detects genes coding for proteins, tRNAs, and rRNAs (5S, 16S and 23S). FIAP also allows users to include an infinite number of custom databases. This feature is extremely valuable because it allows users to add a personal “flavor” to the annotation and optimize the process for a specific bacterial genome. FIAP can annotate single and multiple sequences, which allows...
    Downloads: 0 This Week
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  • 23

    DRAMMS

    A Deformable Medical Image Registration Toolbox

    DRAMMS is a software package designed for 2D-to-2D and 3D-to-3D deformable medical image registration tasks. Released by Section of Biomedical Image Analysis (SBIA) at the University of Pennsylvania. Some typical applications of DRAMMS include, -- Cross-subject registration of the same organ (can be brain, breast, cardiac, etc); -- Mono- and Multi-modality registration (MRI, CT, histology); -- Longitudinal registration (pediatric brain growth, cancer development, mouse...
    Downloads: 5 This Week
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  • 24
    fzcal

    fzcal

    A calculator capable of complex arithmetics

    A command line calculator capable of complex arithmetics.
    Downloads: 0 This Week
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  • 25
    Create, check, annotate, merge, diff, split SBML (System Biology Markup Lanugage) documents. The latest version of semanticSBML is webbased with a RESTful interface.
    Downloads: 0 This Week
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