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TRANSFOG DAS (Translational and Functional Onco-Genomics Distributed Annotation System) is an XML-based annotation system to allow the discovery and analysis of candidate genes potentially involved in cancer onset and progression.
AmiGram is the AMI Graphical Representation and Annotation Module. It is a general-purpose tool for multimodal corpus annotation and allows the time line based annoation of NXT corpora in a layer based environment.
Virtual interactive experiments (vexp) is a framework to promote the developmentand use of cooperative e-learning experiments over the internet. Interactive scientific experiments which can be controlled by various users synchronously.
jGABL (the Java Graph Algorithm Base Library) is a java library for the implementation of graph algorithms. It covers a hierarchy of graph concepts, various graph implementations, and algorithm animation.
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Manuelito is a Java tool for decrypting posttranslational modification (PTM) patterns of proteins based on MALDI mass spectrometry spectra. It was built for analysing the 'histone code' but it can be applied to any other highly modified protein.
WikiVis is a tool to analyze Wikipedia based on several aspects. The main objective is to visualize the conclusions of this examination, which focusses on the editing frequency and relevance of articles and categories as well as the activity of users.
EMT is an application to draw and test turing machines intended to help Formal Languages and Automata students to understand how turing machines work and test their own turing machines.
JXML2OWL Project is divided in two sub projects: JXML2OWL API, a library for mapping XML schemas to OWL Ontologies on the JAVA plaform. JXML2OWL Mapper, an easy to use standalone application with a graphical user interface using the JXML2OWL API.
ballotbox is a java library consist of 36 algorithms derived from 23 Social Choice Rules (Voting Methods). Uses jgrapht graph theory project and it is own Preference class to represent preferences. Includes preference similarity algorithms.
Uranograph is a set of classes and methods written in Java for generating printable and viewable star charts based on different data sources. Currently the Lambert azimuthal equal-area projection is implemented. Output in SVG and PDF (with iText library)
This if calculator for complex numbers. It works with algebraic and trigonometrical form and has multiple memory slots. There are many mathematical functions like sin, cos and etc.
Pulga is a program for numerical simulation of dynamical systems designed to provide students and researchers an easy way to model and qualitatively analyse their systems on a computer without the difficulty of traditional computer programming languages.
FormatCheck screens flat files looking for violations in the format of the data. It uses a set of XML files that define the rules for each file format. The Swing front-end allows the user to run the verification, view and print the errors.
COB editor is a collaborative editor for biological ontology (e.g., Gene Ontology) building. Building on the idea of modular ontology from KR research, it supports multiple people to work on the same ontology.
The CHIP Cluster Generator attempts to create spatio-temporal cluster data in an automated fashion to help evaluate epidemic detection software. The spatio-temporal data will then be used to determine robustness of spatial detection algorithms.
A very basic, very simple Java based GPS tool. Reads NMEA from GPS device over serial port - and does a few usefull things with it. The goal is to have something that can run and be useful on a desktop, laptop and handheld device.